Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.41□□□□□ -2.64
UPK1AO00322 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.41□□□□□ -2.64
UPK1AO00322 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.41□□□□□ -2.64
UPK1AO00322 SNORD75.2-201ENST00000408784 58 ntBASIC-1.41□□□□□ -2.64
UPK1AO00322 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.42□□□□□ -2.64
UPK1AO00322 MIR568-201ENST00000385036 95 ntBASIC-1.42□□□□□ -2.64
UPK1AO00322 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.42□□□□□ -2.64
UPK1AO00322 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.42□□□□□ -2.64
UPK1AO00322 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.42□□□□□ -2.64
UPK1AO00322 AC104996.3-201ENST00000590718 94 ntBASIC-1.42□□□□□ -2.64
UPK1AO00322 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.42□□□□□ -2.64
UPK1AO00322 RNU6-832P-201ENST00000363319 107 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 AL118496.2-201ENST00000448300 230 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 RNU7-24P-201ENST00000458867 62 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 RNU6-479P-201ENST00000516348 105 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 MIR548X2-201ENST00000579776 100 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 MIR3064-201ENST00000581130 66 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 AL353803.5-201ENST00000599815 141 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 AC132825.6-201ENST00000638861 357 ntBASIC-1.43□□□□□ -2.64
UPK1AO00322 SNORD116-18-201ENST00000383961 92 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 MIR548A1-201ENST00000385041 97 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 MIR889-201ENST00000401280 79 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 SNORA81.3-201ENST00000517283 198 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 MIR4439-201ENST00000583746 80 ntBASIC-1.44□□□□□ -2.64
UPK1AO00322 RNY3P2-201ENST00000362918 102 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 SNORD58C-201ENST00000365223 64 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 RNU6-644P-201ENST00000391155 98 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 RNA5SP476-201ENST00000516613 103 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 MIR548Z-201ENST00000584743 97 ntBASIC-1.45□□□□□ -2.64
UPK1AO00322 SNORD45B-201ENST00000364617 72 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 RNU7-120P-201ENST00000459334 63 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 MIR4520-1-201ENST00000582609 70 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 AC006254.2-201ENST00000603259 279 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 MIR1246-201ENST00000636535 73 ntBASIC-1.46□□□□□ -2.64
UPK1AO00322 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.47□□□□□ -2.64
UPK1AO00322 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.47□□□□□ -2.64
UPK1AO00322 MTATP6P29-201ENST00000415057 132 ntBASIC-1.47□□□□□ -2.64
UPK1AO00322 RNU6-682P-201ENST00000363843 106 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 SNORA24B-201ENST00000384176 131 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 MIR1285-2-201ENST00000408311 88 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 RNU6-519P-201ENST00000410590 108 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 RNA5SP180-201ENST00000516181 101 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 RNU6-158P-201ENST00000517104 100 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 AC103810.7-201ENST00000607821 91 ntBASIC-1.48□□□□□ -2.65
UPK1AO00322 MIR409-201ENST00000362237 79 ntBASIC-1.49□□□□□ -2.65
UPK1AO00322 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.49□□□□□ -2.65
UPK1AO00322 SNORD4B-201ENST00000459083 72 ntBASIC-1.49□□□□□ -2.65
UPK1AO00322 RNU6-62P-201ENST00000516526 102 ntBASIC-1.49□□□□□ -2.65
UPK1AO00322 MIR4770-201ENST00000579149 58 ntBASIC-1.49□□□□□ -2.65
UPK1AO00322 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.49□□□□□ -2.65
UPK1AO00322 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.5□□□□□ -2.65
UPK1AO00322 RNU6-813P-201ENST00000384691 107 ntBASIC-1.5□□□□□ -2.65
UPK1AO00322 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.5□□□□□ -2.65
UPK1AO00322 AL445584.3-201ENST00000617173 78 ntBASIC-1.5□□□□□ -2.65
UPK1AO00322 AC090617.8-201ENST00000623339 167 ntBASIC-1.5□□□□□ -2.65
UPK1AO00322 RNU6-924P-201ENST00000362926 108 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 RNU6-260P-201ENST00000384092 107 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 RNA5SP266-201ENST00000410273 108 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 MTND3P2-201ENST00000438452 342 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 MIR4464-201ENST00000580818 92 ntBASIC-1.51□□□□□ -2.65
UPK1AO00322 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 MIR527-201ENST00000385244 85 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 RNA5SP147-201ENST00000516493 109 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 MIR4679-2-201ENST00000578358 77 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 MIR6888-201ENST00000621977 67 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 MIR4773-1-201ENST00000637203 78 ntBASIC-1.52□□□□□ -2.65
UPK1AO00322 RNU5F-1-201ENST00000362507 117 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 RNU6-382P-201ENST00000365181 106 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 MIR1255B2-201ENST00000408618 67 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 snoU13.17-201ENST00000458802 104 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 RNU6-327P-201ENST00000516270 127 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 MIR6509-201ENST00000614603 85 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 AL035470.1-201ENST00000622571 220 ntBASIC-1.53□□□□□ -2.65
UPK1AO00322 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 SNORA33.1-201ENST00000364957 130 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 RNU6-196P-201ENST00000384315 107 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 MIR29B1-201ENST00000385015 81 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 RNA5SP292-201ENST00000390974 118 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 RNU2-51P-201ENST00000410708 197 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 SNORA18.5-201ENST00000516616 101 ntBASIC-1.54□□□□□ -2.66
UPK1AO00322 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 MIR203A-201ENST00000384836 110 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 MIR548I1-201ENST00000408810 149 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.55□□□□□ -2.66
UPK1AO00322 MIR3613-201ENST00000579844 87 ntBASIC-1.55□□□□□ -2.66
UPK1AO00322 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 SNORA2.1-201ENST00000363089 137 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms