Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 RNU6-738P-201ENST00000384531 106 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 RNU7-134P-201ENST00000458997 64 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.7□□□□□ -2.68
DFFAO00273 MIR4306-201ENST00000583390 91 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 RNY3P2-201ENST00000362918 102 ntBASIC-1.71□□□□□ -2.68
DFFAO00273 RNU6-861P-201ENST00000516745 106 ntBASIC-1.71□□□□□ -2.68
DFFAO00273 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.72□□□□□ -2.68
DFFAO00273 SNORD58C-201ENST00000365223 64 ntBASIC-1.72□□□□□ -2.68
DFFAO00273 RNU6-644P-201ENST00000391155 98 ntBASIC-1.72□□□□□ -2.68
DFFAO00273 SNORD4B-201ENST00000459083 72 ntBASIC-1.72□□□□□ -2.68
DFFAO00273 RNU6-62P-201ENST00000516526 102 ntBASIC-1.72□□□□□ -2.68
DFFAO00273 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.72□□□□□ -2.68
DFFAO00273 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.73□□□□□ -2.69
DFFAO00273 AL117351.2-201ENST00000513571 157 ntBASIC-1.73□□□□□ -2.69
DFFAO00273 AC006254.2-201ENST00000603259 279 ntBASIC-1.73□□□□□ -2.69
DFFAO00273 RNU6-682P-201ENST00000363843 106 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 snoU13.17-201ENST00000458802 104 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 RNU7-120P-201ENST00000459334 63 ntBASIC-1.74□□□□□ -2.69
DFFAO00273 SNORD45B-201ENST00000364617 72 ntBASIC-1.75□□□□□ -2.69
DFFAO00273 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.75□□□□□ -2.69
DFFAO00273 SNX3P1X-201ENST00000414887 175 ntBASIC-1.75□□□□□ -2.69
DFFAO00273 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.75□□□□□ -2.69
DFFAO00273 MIR548X2-201ENST00000579776 100 ntBASIC-1.75□□□□□ -2.69
DFFAO00273 RNU6-382P-201ENST00000365181 106 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 RNU6-260P-201ENST00000384092 107 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 RNU6-746P-201ENST00000384112 109 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 MIR3613-201ENST00000579844 87 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 MIR548Z-201ENST00000584743 97 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 AC103810.7-201ENST00000607821 91 ntBASIC-1.76□□□□□ -2.69
DFFAO00273 SNORD116-18-201ENST00000383961 92 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 RNA5SP292-201ENST00000390974 118 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 MIR1255B2-201ENST00000408618 67 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 RNU6-479P-201ENST00000516348 105 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 MIR4679-2-201ENST00000578358 77 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 AL035470.1-201ENST00000622571 220 ntBASIC-1.77□□□□□ -2.69
DFFAO00273 RNU6-924P-201ENST00000362926 108 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 SNORA33.1-201ENST00000364957 130 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 RNU6-813P-201ENST00000384691 107 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 RNU6-519P-201ENST00000410590 108 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 MTATP6P29-201ENST00000415057 132 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 AP001094.1-201ENST00000579805 193 ntBASIC-1.78□□□□□ -2.69
DFFAO00273 SNORA63-201ENST00000363450 132 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 RNA5SP331-201ENST00000364986 107 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
DFFAO00273 SNORD90-201ENST00000391145 111 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 SNORD63.1-201ENST00000516178 80 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 RNA5SP147-201ENST00000516493 109 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 RNU6-706P-201ENST00000517229 104 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 AC132825.6-201ENST00000638861 357 ntBASIC-1.79□□□□□ -2.7
DFFAO00273 SNORA2.1-201ENST00000363089 137 ntBASIC-1.8□□□□□ -2.7
DFFAO00273 SNORA26.4-201ENST00000391188 123 ntBASIC-1.8□□□□□ -2.7
DFFAO00273 AL118496.2-201ENST00000448300 230 ntBASIC-1.8□□□□□ -2.7
DFFAO00273 MIR548I1-201ENST00000408810 149 ntBASIC-1.81□□□□□ -2.7
DFFAO00273 SNORA18.5-201ENST00000516616 101 ntBASIC-1.81□□□□□ -2.7
DFFAO00273 MIR6509-201ENST00000614603 85 ntBASIC-1.81□□□□□ -2.7
DFFAO00273 MIR4773-1-201ENST00000637203 78 ntBASIC-1.81□□□□□ -2.7
DFFAO00273 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 MIR29B1-201ENST00000385015 81 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 RNU2-51P-201ENST00000410708 197 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 MTND3P2-201ENST00000438452 342 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 RNA5SP461-201ENST00000516451 104 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 MIR198-201ENST00000637333 62 ntBASIC-1.82□□□□□ -2.7
DFFAO00273 RNU5F-1-201ENST00000362507 117 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 SNORD115-33-201ENST00000363723 82 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 MIR203A-201ENST00000384836 110 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 MIR8485-201ENST00000401372 91 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 CYP3A54P-201ENST00000566950 75 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 MIR3657-201ENST00000584818 117 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 MIR6818-201ENST00000621576 65 ntBASIC-1.83□□□□□ -2.7
DFFAO00273 RNU6-824P-201ENST00000363724 104 ntBASIC-1.84□□□□□ -2.7
DFFAO00273 MIR569-201ENST00000385228 96 ntBASIC-1.84□□□□□ -2.7
DFFAO00273 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.84□□□□□ -2.7
DFFAO00273 MIR601-201ENST00000385256 79 ntBASIC-1.85□□□□□ -2.71
DFFAO00273 RNU6-394P-201ENST00000410735 107 ntBASIC-1.85□□□□□ -2.71
DFFAO00273 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.85□□□□□ -2.71
DFFAO00273 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.86□□□□□ -2.71
DFFAO00273 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.86□□□□□ -2.71
DFFAO00273 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 282.6 ms