Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNA5SP327-201ENST00000362494 101 ntBASIC1.13□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNA5SP215-201ENST00000363440 122 ntBASIC1.13□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD113-4-201ENST00000364802 75 ntBASIC1.13□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-92P-201ENST00000605893 104 ntBASIC1.13□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 AC018659.1-201ENST00000551083 169 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 MIR3938-201ENST00000582157 103 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 MIR4639-201ENST00000584938 69 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 MIR6739-201ENST00000622461 75 ntBASIC1.12□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD60.1-201ENST00000362451 73 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU1-141P-201ENST00000364623 158 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-302P-201ENST00000365249 107 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-1162P-201ENST00000384443 104 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD41.1-201ENST00000391000 69 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-122P-201ENST00000516818 107 ntBASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD18A-201ENST00000363753 72 ntBASIC1.1□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-726P-201ENST00000364680 107 ntBASIC1.1□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-269P-201ENST00000391077 97 ntBASIC1.1□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNA5SP484-201ENST00000458857 111 ntBASIC1.1□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-1312P-201ENST00000362425 108 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD105-201ENST00000386910 85 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 AC021146.9-201ENST00000512503 156 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-135P-201ENST00000516769 101 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD114-4-201ENST00000363962 75 ntBASIC1.07□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.07□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR521-2-201ENST00000384818 87 ntBASIC1.07□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORA33.1-201ENST00000364957 130 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR517B-201ENST00000385102 67 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 RNU6-808P-201ENST00000391233 108 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR3612-201ENST00000579753 87 ntBASIC1.06□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 RNU6-1184P-201ENST00000384588 108 ntBASIC1.05□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR4473-201ENST00000583731 91 ntBASIC1.05□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORA8.2-201ENST00000384372 139 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR652-201ENST00000385278 98 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD113-2-201ENST00000391082 72 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 U7.7-201ENST00000459276 60 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR548AD-201ENST00000584780 82 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 Y_RNA.250-201ENST00000364542 110 ntBASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 MIR489-201ENST00000384923 84 ntBASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 U4.4-201ENST00000620626 117 ntBASIC1.03□□□□□ -2.24
C1QTNF3-AMACRE9PGA6 Y_RNA.125-201ENST00000363371 111 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR573-201ENST00000384964 99 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNA5SP227-201ENST00000516184 113 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU7-174P-201ENST00000516248 59 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR548AE1-201ENST00000583292 70 ntBASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU6-698P-201ENST00000363523 107 ntBASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU6-34P-201ENST00000364874 107 ntBASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SCARNA17.3-201ENST00000516381 125 ntBASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORA9.1-201ENST00000362412 131 ntBASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORA63.6-201ENST00000364921 119 ntBASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 AC006210.1-201ENST00000424882 111 ntBASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 uc_338.10-201ENST00000621872 182 ntBASIC1□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 Y_RNA.325-201ENST00000365171 122 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORA15B-2-201ENST00000384058 135 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORA15B-1-201ENST00000384334 135 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU6-1246P-201ENST00000391064 107 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORD110-201ENST00000408189 75 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 snoU13.18-201ENST00000459483 104 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 AL162376.1-201ENST00000624117 175 ntBASIC0.99□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 Y_RNA.633-201ENST00000459107 95 ntBASIC0.98□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 Y_RNA.246-201ENST00000364495 108 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms