Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SNORA25-201ENST00000384384 134 ntBASIC1.5□□□□□ -2.17
SPDYE3A6NKU9 AC021146.9-201ENST00000512503 156 ntBASIC1.5□□□□□ -2.17
SPDYE3A6NKU9 RNA5SP47-201ENST00000517230 109 ntBASIC1.5□□□□□ -2.17
SPDYE3A6NKU9 U2.7-201ENST00000619197 100 ntBASIC1.5□□□□□ -2.17
SPDYE3A6NKU9 RNU6-302P-201ENST00000365249 107 ntBASIC1.49□□□□□ -2.17
SPDYE3A6NKU9 RNU6-808P-201ENST00000391233 108 ntBASIC1.49□□□□□ -2.17
SPDYE3A6NKU9 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
SPDYE3A6NKU9 RNU6-469P-201ENST00000516253 101 ntBASIC1.49□□□□□ -2.17
SPDYE3A6NKU9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 MIR582-201ENST00000365731 98 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 RNU6-1162P-201ENST00000384443 104 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 MIR521-2-201ENST00000384818 87 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 RNU7-74P-201ENST00000459104 62 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 RNU7-174P-201ENST00000516248 59 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 MIR3678-201ENST00000578455 94 ntBASIC1.48□□□□□ -2.17
SPDYE3A6NKU9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 RNU6-1246P-201ENST00000391064 107 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 RNU6-321P-201ENST00000410912 106 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 RNU4-88P-201ENST00000411220 86 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 TRMT112P2-201ENST00000512910 132 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 MIR548AE1-201ENST00000583292 70 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
SPDYE3A6NKU9 MIR517B-201ENST00000385102 67 ntBASIC1.46□□□□□ -2.18
SPDYE3A6NKU9 SNORD105-201ENST00000386910 85 ntBASIC1.46□□□□□ -2.18
SPDYE3A6NKU9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SPDYE3A6NKU9 U7.7-201ENST00000459276 60 ntBASIC1.46□□□□□ -2.18
SPDYE3A6NKU9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SPDYE3A6NKU9 MIR652-201ENST00000385278 98 ntBASIC1.45□□□□□ -2.18
SPDYE3A6NKU9 MIR4473-201ENST00000583731 91 ntBASIC1.45□□□□□ -2.18
SPDYE3A6NKU9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 Y_RNA.125-201ENST00000363371 111 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 SNORA41B-201ENST00000384785 128 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 MIR3612-201ENST00000579753 87 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.44□□□□□ -2.18
SPDYE3A6NKU9 RNU6-698P-201ENST00000363523 107 ntBASIC1.43□□□□□ -2.18
SPDYE3A6NKU9 RNU6-34P-201ENST00000364874 107 ntBASIC1.43□□□□□ -2.18
SPDYE3A6NKU9 SNORD113-2-201ENST00000391082 72 ntBASIC1.43□□□□□ -2.18
SPDYE3A6NKU9 Y_RNA.633-201ENST00000459107 95 ntBASIC1.43□□□□□ -2.18
SPDYE3A6NKU9 SNORA9.1-201ENST00000362412 131 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 Y_RNA.325-201ENST00000365171 122 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 SNORA8.2-201ENST00000384372 139 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 SNORD124-201ENST00000459577 104 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 RNU6-135P-201ENST00000516769 101 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.42□□□□□ -2.18
SPDYE3A6NKU9 SNORD114-4-201ENST00000363962 75 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 Y_RNA.250-201ENST00000364542 110 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 MIR573-201ENST00000384964 99 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 AC090617.8-201ENST00000623339 167 ntBASIC1.4□□□□□ -2.19
SPDYE3A6NKU9 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
SPDYE3A6NKU9 MIR548E-201ENST00000408287 88 ntBASIC1.39□□□□□ -2.19
SPDYE3A6NKU9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.39□□□□□ -2.19
SPDYE3A6NKU9 AL162376.1-201ENST00000624117 175 ntBASIC1.39□□□□□ -2.19
SPDYE3A6NKU9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SPDYE3A6NKU9 SNORA36.1-201ENST00000363424 132 ntBASIC1.38□□□□□ -2.19
SPDYE3A6NKU9 SNORA63.6-201ENST00000364921 119 ntBASIC1.38□□□□□ -2.19
SPDYE3A6NKU9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.38□□□□□ -2.19
SPDYE3A6NKU9 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
SPDYE3A6NKU9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.37□□□□□ -2.19
SPDYE3A6NKU9 MIR4752-201ENST00000579672 72 ntBASIC1.37□□□□□ -2.19
SPDYE3A6NKU9 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
SPDYE3A6NKU9 RNU6-753P-201ENST00000363926 107 ntBASIC1.36□□□□□ -2.19
SPDYE3A6NKU9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.36□□□□□ -2.19
SPDYE3A6NKU9 FABP5P4-201ENST00000437203 171 ntBASIC1.36□□□□□ -2.19
SPDYE3A6NKU9 RNA5SP227-201ENST00000516184 113 ntBASIC1.36□□□□□ -2.19
SPDYE3A6NKU9 Y_RNA.246-201ENST00000364495 108 ntBASIC1.35□□□□□ -2.19
SPDYE3A6NKU9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.35□□□□□ -2.19
SPDYE3A6NKU9 SNORA70.25-201ENST00000612741 95 ntBASIC1.35□□□□□ -2.19
SPDYE3A6NKU9 Y_RNA.379-201ENST00000365653 102 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 SNORA15B-2-201ENST00000384058 135 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 SNORA15B-1-201ENST00000384334 135 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 AC006210.1-201ENST00000424882 111 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 uc_338.10-201ENST00000621872 182 ntBASIC1.34□□□□□ -2.19
SPDYE3A6NKU9 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 CYP3A54P-201ENST00000566950 75 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 MIR548AG1-201ENST00000579932 66 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 MIR7111-201ENST00000619751 72 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 MIR6828-201ENST00000636181 60 ntBASIC1.33□□□□□ -2.2
SPDYE3A6NKU9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.32□□□□□ -2.2
SPDYE3A6NKU9 SNORD110-201ENST00000408189 75 ntBASIC1.32□□□□□ -2.2
SPDYE3A6NKU9 RNU6-231P-201ENST00000517122 103 ntBASIC1.32□□□□□ -2.2
SPDYE3A6NKU9 AC011195.1-201ENST00000578177 177 ntBASIC1.32□□□□□ -2.2
SPDYE3A6NKU9 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
SPDYE3A6NKU9 MIR18A-201ENST00000362310 71 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 SNORD116.2-201ENST00000391251 93 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 MIR7107-201ENST00000611489 80 ntBASIC1.31□□□□□ -2.2
SPDYE3A6NKU9 U6.96-201ENST00000636425 70 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms