Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 MIR1255B1-201ENST00000636325 63 ntBASIC-2.23□□□□□ -2.77
USP54Q70EL1 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 RNU6-363P-201ENST00000362895 105 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 RNU6-990P-201ENST00000364385 104 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 MIR519A2-201ENST00000384990 87 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 SNORD75.2-201ENST00000408784 58 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 SNORA7.5-201ENST00000410672 110 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Z83846.1-201ENST00000446798 265 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 MIR6844-201ENST00000637122 62 ntBASIC-2.24□□□□□ -2.77
USP54Q70EL1 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 MIR1252-201ENST00000408861 65 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 SNORA19.1-201ENST00000410656 129 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 RNU6-806P-201ENST00000365147 105 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 SNORD50.2-201ENST00000365465 70 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 MIR3163-201ENST00000581592 73 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 MIR6509-201ENST00000614603 85 ntBASIC-2.25□□□□□ -2.77
USP54Q70EL1 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 RNU6-768P-201ENST00000384683 107 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 MIR548A1-201ENST00000385041 97 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 FGF7P6-202ENST00000451282 293 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 RNU6-718P-201ENST00000516166 105 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 RNU7-154P-201ENST00000516194 62 ntBASIC-2.26□□□□□ -2.77
USP54Q70EL1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.26□□□□□ -2.77
USP54Q70EL1 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.27□□□□□ -2.77
USP54Q70EL1 RNU6-508P-201ENST00000363231 103 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 RNU6-409P-201ENST00000384114 104 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 MT-TI-201ENST00000387365 69 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 U7.5-201ENST00000517224 61 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 MIR3140-201ENST00000583685 90 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 MIR4760-201ENST00000585040 80 ntBASIC-2.28□□□□□ -2.77
USP54Q70EL1 MIR521-2-201ENST00000384818 87 ntBASIC-2.29□□□□□ -2.78
USP54Q70EL1 RNU6-168P-201ENST00000516189 101 ntBASIC-2.29□□□□□ -2.78
USP54Q70EL1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.29□□□□□ -2.78
USP54Q70EL1 MIR5683-201ENST00000636514 76 ntBASIC-2.29□□□□□ -2.78
USP54Q70EL1 RNA5SP405-201ENST00000363059 114 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 MT-TL1-201ENST00000386347 75 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 MIR548U-201ENST00000390728 81 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.3□□□□□ -2.78
USP54Q70EL1 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.3□□□□□ -2.78
USP54Q70EL1 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 RNU6-194P-201ENST00000363862 105 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 SNORA33.1-201ENST00000364957 130 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 MTATP6P29-201ENST00000415057 132 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 AC090616.4-201ENST00000448026 115 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 RNA5SP147-201ENST00000516493 109 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 MIR203A-201ENST00000384836 110 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 MT-TM-201ENST00000387377 68 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 AP002795.1-201ENST00000534879 84 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 MIR3646-201ENST00000578301 84 ntBASIC-2.31□□□□□ -2.78
USP54Q70EL1 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.32□□□□□ -2.78
USP54Q70EL1 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.32□□□□□ -2.78
USP54Q70EL1 SNORD19-201ENST00000391191 68 ntBASIC-2.32□□□□□ -2.78
USP54Q70EL1 AC006254.2-201ENST00000603259 279 ntBASIC-2.32□□□□□ -2.78
USP54Q70EL1 RNU6-79P-201ENST00000362511 107 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 MIR548F1-201ENST00000408667 84 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 AL691482.2-201ENST00000457453 84 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 RNU6-277P-201ENST00000516272 106 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 RNY3P16-201ENST00000516338 101 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 RNU6-720P-201ENST00000516363 108 ntBASIC-2.33□□□□□ -2.78
USP54Q70EL1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.33□□□□□ -2.78
USP54Q70EL1 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.34□□□□□ -2.78
USP54Q70EL1 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.34□□□□□ -2.78
USP54Q70EL1 snoU13.17-201ENST00000458802 104 ntBASIC-2.34□□□□□ -2.78
USP54Q70EL1 MIR6739-201ENST00000622461 75 ntBASIC-2.34□□□□□ -2.78
USP54Q70EL1 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.35□□□□□ -2.79
USP54Q70EL1 SNORA24B-201ENST00000384176 131 ntBASIC-2.35□□□□□ -2.79
USP54Q70EL1 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.35□□□□□ -2.79
USP54Q70EL1 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.36□□□□□ -2.79
USP54Q70EL1 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.36□□□□□ -2.79
USP54Q70EL1 RNU6-132P-201ENST00000383863 107 ntBASIC-2.36□□□□□ -2.79
USP54Q70EL1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.36□□□□□ -2.79
USP54Q70EL1 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.36□□□□□ -2.79
USP54Q70EL1 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.36□□□□□ -2.79
USP54Q70EL1 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 SNORA75.5-201ENST00000391291 81 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 RNU2-38P-201ENST00000410856 79 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 RNU7-85P-201ENST00000458851 63 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 MIR3121-201ENST00000579680 77 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 MIR3657-201ENST00000584818 117 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 MIR3149-201ENST00000584629 83 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 U6.106-201ENST00000636360 105 ntBASIC-2.37□□□□□ -2.79
USP54Q70EL1 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 241.3 ms