Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RNY4P6-201ENST00000363667 96 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 SNORD50.2-201ENST00000365465 70 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-24P-201ENST00000384440 107 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 MIR147A-201ENST00000385079 72 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 SNORD64-201ENST00000386683 67 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-816P-201ENST00000390914 107 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.3□□□□□ -2.62
SSX1Q16384 RNU6-495P-201ENST00000362995 107 ntBASIC-1.31□□□□□ -2.62
SSX1Q16384 RNU6-797P-201ENST00000363101 109 ntBASIC-1.31□□□□□ -2.62
SSX1Q16384 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.31□□□□□ -2.62
SSX1Q16384 RNA5SP67-201ENST00000516422 131 ntBASIC-1.31□□□□□ -2.62
SSX1Q16384 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.32□□□□□ -2.62
SSX1Q16384 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.32□□□□□ -2.62
SSX1Q16384 MTCYBP9-201ENST00000431021 303 ntBASIC-1.32□□□□□ -2.62
SSX1Q16384 RNU7-85P-201ENST00000458851 63 ntBASIC-1.32□□□□□ -2.62
SSX1Q16384 uc_338.19-201ENST00000616808 99 ntBASIC-1.32□□□□□ -2.62
SSX1Q16384 SNORA63.2-201ENST00000362603 126 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 SNORA62.4-201ENST00000365504 151 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 MIR568-201ENST00000385036 95 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 RNU6-781P-201ENST00000516377 101 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 SNORA81.3-201ENST00000517283 198 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 YWHAEP3-201ENST00000582767 121 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 MIR4499-201ENST00000584834 69 ntBASIC-1.33□□□□□ -2.62
SSX1Q16384 RNU6-151P-201ENST00000364158 107 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 RNU6-132P-201ENST00000383863 107 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 MIR124-2-201ENST00000385081 109 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 AL158147.1-201ENST00000443970 75 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 AL117351.2-201ENST00000513571 157 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 RNA5SP470-201ENST00000516463 106 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.34□□□□□ -2.62
SSX1Q16384 AC140658.3-201ENST00000567603 271 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 MIR378F-201ENST00000578143 78 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 AP001340.1-201ENST00000624405 217 ntBASIC-1.34□□□□□ -2.62
SSX1Q16384 MIR577-201ENST00000385196 96 ntBASIC-1.35□□□□□ -2.63
SSX1Q16384 MIR1302-3-201ENST00000408128 138 ntBASIC-1.35□□□□□ -2.63
SSX1Q16384 MIR3140-201ENST00000583685 90 ntBASIC-1.35□□□□□ -2.63
SSX1Q16384 MIR382-201ENST00000637119 76 ntBASIC-1.35□□□□□ -2.63
SSX1Q16384 RNU6-990P-201ENST00000364385 104 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 RNU6-738P-201ENST00000384531 106 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
SSX1Q16384 RNU6-274P-201ENST00000459566 107 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 AL513043.2-201ENST00000573941 143 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.36□□□□□ -2.63
SSX1Q16384 RNU6-208P-201ENST00000362431 107 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 SNORD114-17-201ENST00000364699 75 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 SCARNA18B-201ENST00000458806 135 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 AC021146.9-201ENST00000512503 156 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 U6.96-201ENST00000636425 70 ntBASIC-1.37□□□□□ -2.63
SSX1Q16384 RNA5SP192-201ENST00000364404 120 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 SNORA24B-201ENST00000384176 131 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 MIR513C-201ENST00000401352 84 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 RNU7-24P-201ENST00000458867 62 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 RNY1P9-201ENST00000532431 109 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 MIR4694-201ENST00000578534 80 ntBASIC-1.38□□□□□ -2.63
SSX1Q16384 MIR548U-201ENST00000390728 81 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 RNU6-861P-201ENST00000516745 106 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 AC068339.1-201ENST00000526965 141 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 MIR3064-201ENST00000581130 66 ntBASIC-1.39□□□□□ -2.63
SSX1Q16384 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.39□□□□□ -2.63
SSX1Q16384 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 SNORD75.2-201ENST00000408784 58 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 AC025166.1-201ENST00000612411 163 ntBASIC-1.4□□□□□ -2.63
SSX1Q16384 RNU6-832P-201ENST00000363319 107 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 MIR3115-201ENST00000577915 68 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 AP001094.1-201ENST00000579805 193 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 MIR3165-201ENST00000579874 75 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 MIR4464-201ENST00000580818 92 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 AC090617.8-201ENST00000623339 167 ntBASIC-1.41□□□□□ -2.64
SSX1Q16384 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.42□□□□□ -2.64
SSX1Q16384 snoU83B.1-201ENST00000517136 88 ntBASIC-1.42□□□□□ -2.64
SSX1Q16384 AC104996.3-201ENST00000590718 94 ntBASIC-1.42□□□□□ -2.64
SSX1Q16384 AL353803.5-201ENST00000599815 141 ntBASIC-1.42□□□□□ -2.64
SSX1Q16384 U7.2-201ENST00000607576 63 ntBASIC-1.42□□□□□ -2.64
SSX1Q16384 RNU6-682P-201ENST00000363843 106 ntBASIC-1.43□□□□□ -2.64
SSX1Q16384 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.43□□□□□ -2.64
SSX1Q16384 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.43□□□□□ -2.64
SSX1Q16384 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.43□□□□□ -2.64
SSX1Q16384 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.43□□□□□ -2.64
SSX1Q16384 MIR548A1-201ENST00000385041 97 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms