Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU7-200P-201ENST00000516105 62 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 RNU6-346P-201ENST00000516288 111 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 RNA5SP66-201ENST00000517178 101 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 MIR5704-201ENST00000584029 77 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 MIR548Z-201ENST00000584743 97 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 MIR8068-201ENST00000618032 68 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 uc_338.36-201ENST00000622331 158 ntBASIC-0.33□□□□□ -2.46
TNFRSF9Q07011 AL157777.2-201ENST00000258070 137 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 RNU6-832P-201ENST00000363319 107 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 SNORD90-201ENST00000391145 111 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 AC244090.1-201ENST00000441884 93 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 RNU7-107P-201ENST00000459121 61 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 MIR3140-201ENST00000583685 90 ntBASIC-0.34□□□□□ -2.46
TNFRSF9Q07011 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 RNU6-900P-201ENST00000384498 102 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 MIR451A-201ENST00000385059 72 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 snosnR66.1-201ENST00000391095 99 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 RNU6-935P-201ENST00000410371 100 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 RNU7-55P-201ENST00000459426 62 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 RNU6-758P-201ENST00000516292 89 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 MIR4679-2-201ENST00000578358 77 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 MIR4694-201ENST00000578534 80 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 AC090425.1-201ENST00000610007 140 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 AL391099.1-201ENST00000624635 187 ntBASIC-0.35□□□□□ -2.47
TNFRSF9Q07011 RNU6-502P-201ENST00000362419 108 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 SNORD115-25-201ENST00000362619 82 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 SNORD50.2-201ENST00000365465 70 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 MIR216B-201ENST00000390186 82 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 AL078595.1-201ENST00000404458 226 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 RNU6-255P-201ENST00000516957 105 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 AC068339.1-201ENST00000526965 141 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 AL513043.2-201ENST00000573941 143 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 MIR4536-1-201ENST00000583537 88 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 MIR8064-201ENST00000612863 90 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 MIR548AZ-201ENST00000616567 95 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.36□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNU6-990P-201ENST00000364385 104 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 MIR604-201ENST00000384880 94 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNU6-337P-201ENST00000391243 106 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 SNORA3B-201ENST00000391305 131 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNU6-721P-201ENST00000410155 105 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNA5SP25-201ENST00000410815 110 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RPS29P8-201ENST00000445109 171 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 FGF7P7-201ENST00000514120 227 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNU6-971P-201ENST00000516920 106 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 SNORA40.17-201ENST00000517256 115 ntBASIC-0.37□□□□□ -2.47
TNFRSF9Q07011 RNY3P2-201ENST00000362918 102 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 SNORA24B-201ENST00000384176 131 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 MIR548A1-201ENST00000385041 97 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 MIR6851-201ENST00000617060 67 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 AC090617.8-201ENST00000623339 167 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 AC093726.3-201ENST00000637588 150 ntBASIC-0.38□□□□□ -2.47
TNFRSF9Q07011 SNORD95.1-201ENST00000364099 68 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 RNU6-905P-201ENST00000384434 107 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 RNA5SP292-201ENST00000390974 118 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 U3.27-201ENST00000391237 200 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 RNU6-65P-201ENST00000516332 98 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 MIR5009-201ENST00000578736 100 ntBASIC-0.39□□□□□ -2.47
TNFRSF9Q07011 RNA5SP368-201ENST00000364298 116 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 RNU6-901P-201ENST00000384593 106 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 RNU6-795P-201ENST00000516323 103 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 MIR3064-201ENST00000581130 66 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 MIR4777-201ENST00000583710 86 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 AC108676.2-201ENST00000605225 163 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 AC103810.7-201ENST00000607821 91 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 MIR3914-2-201ENST00000637339 95 ntBASIC-0.4□□□□□ -2.47
TNFRSF9Q07011 RNU6-495P-201ENST00000362995 107 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 SNORA19.1-201ENST00000410656 129 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 RNU6-592P-201ENST00000411333 103 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 SNORD4B-201ENST00000459083 72 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 SNORD33.1-201ENST00000516213 88 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 RNU6-794P-201ENST00000517261 64 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms