Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU6-382P-201ENST00000365181 106 ntBASIC-1.47□□□□□ -2.64
CD40LGP29965 MIR203A-201ENST00000384836 110 ntBASIC-1.47□□□□□ -2.64
CD40LGP29965 SNORA19.1-201ENST00000410656 129 ntBASIC-1.47□□□□□ -2.64
CD40LGP29965 RNU7-154P-201ENST00000516194 62 ntBASIC-1.47□□□□□ -2.64
CD40LGP29965 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.48□□□□□ -2.65
CD40LGP29965 SNORD50.2-201ENST00000365465 70 ntBASIC-1.48□□□□□ -2.65
CD40LGP29965 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.48□□□□□ -2.65
CD40LGP29965 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
CD40LGP29965 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.48□□□□□ -2.65
CD40LGP29965 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 SNORD115-27-201ENST00000364430 82 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 MT-TW-201ENST00000387382 68 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 RNU6-400P-201ENST00000391173 106 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 MIR3657-201ENST00000584818 117 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 U2.14-201ENST00000615943 113 ntBASIC-1.49□□□□□ -2.65
CD40LGP29965 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.49□□□□□ -2.65
CD40LGP29965 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 RNU6-768P-201ENST00000384683 107 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 RNA5SP266-201ENST00000410273 108 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 MIR3064-201ENST00000581130 66 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 MIR4490-201ENST00000582647 84 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 MIR4536-1-201ENST00000583537 88 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 MIR3149-201ENST00000584629 83 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 AL512310.12-203ENST00000640543 90 ntBASIC-1.5□□□□□ -2.65
CD40LGP29965 RNU6-824P-201ENST00000363724 104 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 AL137067.1-201ENST00000615933 120 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 AC021753.1-201ENST00000635724 168 ntBASIC-1.51□□□□□ -2.65
CD40LGP29965 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.52□□□□□ -2.65
CD40LGP29965 RNU6-608P-201ENST00000383927 104 ntBASIC-1.52□□□□□ -2.65
CD40LGP29965 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.52□□□□□ -2.65
CD40LGP29965 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.52□□□□□ -2.65
CD40LGP29965 AC018880.2-201ENST00000414265 201 ntBASIC-1.52□□□□□ -2.65
CD40LGP29965 RNU6-363P-201ENST00000362895 105 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 MIR521-2-201ENST00000384818 87 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 RNA5SP292-201ENST00000390974 118 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 RNU6-518P-201ENST00000516056 96 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 RNU6-65P-201ENST00000516332 98 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 RNY3P16-201ENST00000516338 101 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 MIR664B-201ENST00000626756 61 ntBASIC-1.53□□□□□ -2.65
CD40LGP29965 MIR369-201ENST00000362155 70 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 RNU6-478P-201ENST00000363904 110 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 MIR520D-201ENST00000385002 87 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
CD40LGP29965 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.54□□□□□ -2.66
CD40LGP29965 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 AC104996.3-201ENST00000590718 94 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 MIR6509-201ENST00000614603 85 ntBASIC-1.54□□□□□ -2.66
CD40LGP29965 RNU6-818P-201ENST00000364837 108 ntBASIC-1.55□□□□□ -2.66
CD40LGP29965 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.55□□□□□ -2.66
CD40LGP29965 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.55□□□□□ -2.66
CD40LGP29965 AL513043.2-201ENST00000573941 143 ntBASIC-1.55□□□□□ -2.66
CD40LGP29965 AL442128.1-201ENST00000615151 90 ntBASIC-1.55□□□□□ -2.66
CD40LGP29965 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 RNU6-695P-201ENST00000391157 104 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 MIR4643-201ENST00000577473 78 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 MIR3163-201ENST00000581592 73 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 MIR4441-201ENST00000582623 100 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 U6atac.1-201ENST00000616025 117 ntBASIC-1.56□□□□□ -2.66
CD40LGP29965 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 AC113195.1-201ENST00000579952 141 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 MIR6739-201ENST00000622461 75 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 MIR4773-1-201ENST00000637203 78 ntBASIC-1.57□□□□□ -2.66
CD40LGP29965 MIR365A-201ENST00000362260 87 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 RNU6-312P-201ENST00000364629 107 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 RNU6-493P-201ENST00000391321 108 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 MTND3P2-201ENST00000438452 342 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 SNORD4B-201ENST00000459083 72 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 RNU6-62P-201ENST00000516526 102 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 MIR3123-201ENST00000583417 75 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 AC139792.2-201ENST00000624218 587 ntBASIC-1.58□□□□□ -2.66
CD40LGP29965 RNU6-275P-201ENST00000364910 107 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 SNORD42.2-201ENST00000365570 69 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 AC006254.2-201ENST00000603259 279 ntBASIC-1.59□□□□□ -2.66
CD40LGP29965 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 MIR548D2-201ENST00000384955 97 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 RNU6-630P-201ENST00000391258 106 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 MIR548Q-201ENST00000408404 100 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 MIR3613-201ENST00000579844 87 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms