Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-647P-201ENST00000364243 107 ntBASIC-1.32□□□□□ -2.62
UPK1BO75841 RNU6-337P-201ENST00000391243 106 ntBASIC-1.32□□□□□ -2.62
UPK1BO75841 snoU13.19-201ENST00000459148 104 ntBASIC-1.32□□□□□ -2.62
UPK1BO75841 AL117351.2-201ENST00000513571 157 ntBASIC-1.32□□□□□ -2.62
UPK1BO75841 RNU6-65P-201ENST00000516332 98 ntBASIC-1.32□□□□□ -2.62
UPK1BO75841 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.32□□□□□ -2.62
UPK1BO75841 RNU6-797P-201ENST00000363101 109 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 SNORA63.6-201ENST00000364921 119 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 MIRLET7B-201ENST00000385140 83 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 SNORD18.2-201ENST00000459604 70 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 MIR4536-1-201ENST00000583537 88 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 AC062037.2-201ENST00000610137 73 ntBASIC-1.33□□□□□ -2.62
UPK1BO75841 RNU6-816P-201ENST00000390914 107 ntBASIC-1.34□□□□□ -2.62
UPK1BO75841 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.34□□□□□ -2.62
UPK1BO75841 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.34□□□□□ -2.62
UPK1BO75841 AC072026.1-201ENST00000605023 201 ntBASIC-1.34□□□□□ -2.62
UPK1BO75841 MIR382-201ENST00000637119 76 ntBASIC-1.34□□□□□ -2.62
UPK1BO75841 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.35□□□□□ -2.63
UPK1BO75841 MIR568-201ENST00000385036 95 ntBASIC-1.35□□□□□ -2.63
UPK1BO75841 RNU6-781P-201ENST00000516377 101 ntBASIC-1.35□□□□□ -2.63
UPK1BO75841 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.35□□□□□ -2.63
UPK1BO75841 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 RNU6-151P-201ENST00000364158 107 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 SNORD115-23-201ENST00000364461 82 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 MIR124-2-201ENST00000385081 109 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 MTCYBP9-201ENST00000431021 303 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.36□□□□□ -2.63
UPK1BO75841 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.37□□□□□ -2.63
UPK1BO75841 RNU6-706P-201ENST00000517229 104 ntBASIC-1.37□□□□□ -2.63
UPK1BO75841 RNY1P9-201ENST00000532431 109 ntBASIC-1.37□□□□□ -2.63
UPK1BO75841 RNY4P6-201ENST00000363667 96 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 SNORD50.2-201ENST00000365465 70 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 RNU7-85P-201ENST00000458851 63 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 MIR3140-201ENST00000583685 90 ntBASIC-1.38□□□□□ -2.63
UPK1BO75841 RNU6-990P-201ENST00000364385 104 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 RNU6-132P-201ENST00000383863 107 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 MIR147A-201ENST00000385079 72 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
UPK1BO75841 MIR1302-3-201ENST00000408128 138 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 RNA5SP67-201ENST00000516422 131 ntBASIC-1.39□□□□□ -2.63
UPK1BO75841 RNU6-495P-201ENST00000362995 107 ntBASIC-1.4□□□□□ -2.63
UPK1BO75841 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.4□□□□□ -2.63
UPK1BO75841 MIR577-201ENST00000385196 96 ntBASIC-1.4□□□□□ -2.63
UPK1BO75841 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.4□□□□□ -2.63
UPK1BO75841 AL158147.1-201ENST00000443970 75 ntBASIC-1.4□□□□□ -2.63
UPK1BO75841 SNORA63.2-201ENST00000362603 126 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 RNU6-738P-201ENST00000384531 106 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 RNU6-30P-201ENST00000384561 107 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 MIR513C-201ENST00000401352 84 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 AC021146.9-201ENST00000512503 156 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 RNU6-861P-201ENST00000516745 106 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 AL513043.2-201ENST00000573941 143 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.41□□□□□ -2.64
UPK1BO75841 SNORD114-17-201ENST00000364699 75 ntBASIC-1.42□□□□□ -2.64
UPK1BO75841 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.42□□□□□ -2.64
UPK1BO75841 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.42□□□□□ -2.64
UPK1BO75841 U6.96-201ENST00000636425 70 ntBASIC-1.42□□□□□ -2.64
UPK1BO75841 RNU4-32P-201ENST00000363404 141 ntBASIC-1.43□□□□□ -2.64
UPK1BO75841 SNORA81.3-201ENST00000517283 198 ntBASIC-1.43□□□□□ -2.64
UPK1BO75841 AP001340.1-201ENST00000624405 217 ntBASIC-1.43□□□□□ -2.64
UPK1BO75841 RNU6-208P-201ENST00000362431 107 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 AC025166.1-201ENST00000612411 163 ntBASIC-1.44□□□□□ -2.64
UPK1BO75841 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 SNORA62.4-201ENST00000365504 151 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 SNORD57-201ENST00000448188 72 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 YWHAEP3-201ENST00000582767 121 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 AC090617.8-201ENST00000623339 167 ntBASIC-1.45□□□□□ -2.64
UPK1BO75841 MIR548U-201ENST00000390728 81 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 AL118496.2-201ENST00000448300 230 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 snoU83B.1-201ENST00000517136 88 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 MIR4694-201ENST00000578534 80 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 AP001094.1-201ENST00000579805 193 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 MIR3064-201ENST00000581130 66 ntBASIC-1.46□□□□□ -2.64
UPK1BO75841 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.47□□□□□ -2.64
UPK1BO75841 HLA-S-202ENST00000425174 53 ntBASIC-1.47□□□□□ -2.64
UPK1BO75841 AC026421.1-201ENST00000519101 163 ntBASIC-1.47□□□□□ -2.64
UPK1BO75841 AC068339.1-201ENST00000526965 141 ntBASIC-1.47□□□□□ -2.64
UPK1BO75841 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.47□□□□□ -2.64
UPK1BO75841 MIR4320-201ENST00000636981 65 ntBASIC-1.47□□□□□ -2.64
UPK1BO75841 RNU6-832P-201ENST00000363319 107 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 SNORA63-201ENST00000363450 132 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 RNU6-682P-201ENST00000363843 106 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms