Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.21□□□□□ -2.6
AP3B1O00203 MIRLET7B-201ENST00000385140 83 ntBASIC-1.21□□□□□ -2.6
AP3B1O00203 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.21□□□□□ -2.6
AP3B1O00203 MIR4324-201ENST00000584846 72 ntBASIC-1.21□□□□□ -2.6
AP3B1O00203 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.21□□□□□ -2.6
AP3B1O00203 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNU6-132P-201ENST00000383863 107 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNU7-85P-201ENST00000458851 63 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNU6-274P-201ENST00000459566 107 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNA5SP470-201ENST00000516463 106 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 MIR378F-201ENST00000578143 78 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 MIR3140-201ENST00000583685 90 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
AP3B1O00203 RNU6-990P-201ENST00000364385 104 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 RNU6-24P-201ENST00000384440 107 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 MIR577-201ENST00000385196 96 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 AL118496.2-201ENST00000448300 230 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.23□□□□□ -2.61
AP3B1O00203 SNORA63-201ENST00000363450 132 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 RNY4P6-201ENST00000363667 96 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 SNORD115-23-201ENST00000364461 82 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 SNORD50.2-201ENST00000365465 70 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
AP3B1O00203 MIR513C-201ENST00000401352 84 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 AL158147.1-201ENST00000443970 75 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 SNORD18.2-201ENST00000459604 70 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 SNORA81.3-201ENST00000517283 198 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 MIR548AX-201ENST00000580117 73 ntBASIC-1.24□□□□□ -2.61
AP3B1O00203 SNORD74.6-201ENST00000364796 70 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 AL513043.2-201ENST00000573941 143 ntBASIC-1.25□□□□□ -2.61
AP3B1O00203 RNU6-682P-201ENST00000363843 106 ntBASIC-1.26□□□□□ -2.61
AP3B1O00203 SNORD114-15-201ENST00000364687 72 ntBASIC-1.26□□□□□ -2.61
AP3B1O00203 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.26□□□□□ -2.61
AP3B1O00203 MIR124-2-201ENST00000385081 109 ntBASIC-1.26□□□□□ -2.61
AP3B1O00203 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.26□□□□□ -2.61
AP3B1O00203 RNU6-495P-201ENST00000362995 107 ntBASIC-1.27□□□□□ -2.61
AP3B1O00203 SNORD116-18-201ENST00000383961 92 ntBASIC-1.27□□□□□ -2.61
AP3B1O00203 SNORD64-201ENST00000386683 67 ntBASIC-1.27□□□□□ -2.61
AP3B1O00203 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.27□□□□□ -2.61
AP3B1O00203 AC025166.1-201ENST00000612411 163 ntBASIC-1.27□□□□□ -2.61
AP3B1O00203 SNORA63.2-201ENST00000362603 126 ntBASIC-1.28□□□□□ -2.61
AP3B1O00203 RNU6-431P-201ENST00000383874 107 ntBASIC-1.28□□□□□ -2.61
AP3B1O00203 AC021146.9-201ENST00000512503 156 ntBASIC-1.28□□□□□ -2.61
AP3B1O00203 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.28□□□□□ -2.61
AP3B1O00203 AP001340.1-201ENST00000624405 217 ntBASIC-1.28□□□□□ -2.61
AP3B1O00203 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
AP3B1O00203 RNA5SP395-201ENST00000516567 118 ntBASIC-1.29□□□□□ -2.62
AP3B1O00203 SNORD58C-201ENST00000365223 64 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 RNU6-10P-201ENST00000384036 107 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 MIR3064-201ENST00000581130 66 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.3□□□□□ -2.62
AP3B1O00203 MIR4306-201ENST00000583390 91 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 AC090617.8-201ENST00000623339 167 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 U6.96-201ENST00000636425 70 ntBASIC-1.3□□□□□ -2.62
AP3B1O00203 RNU6-832P-201ENST00000363319 107 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 RNU6-574P-201ENST00000384265 107 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 RNU7-120P-201ENST00000459334 63 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 AC140658.3-201ENST00000567603 271 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 MIR4694-201ENST00000578534 80 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 MIR3613-201ENST00000579844 87 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 U7.2-201ENST00000607576 63 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 AL035470.1-201ENST00000622571 220 ntBASIC-1.31□□□□□ -2.62
AP3B1O00203 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 SNORD114-17-201ENST00000364699 75 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 SNORA24B-201ENST00000384176 131 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 RNA5SP272-201ENST00000516095 111 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 RNU6-327P-201ENST00000516270 127 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 MIR548X2-201ENST00000579776 100 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 MIR4503-201ENST00000582187 83 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 AC104996.3-201ENST00000590718 94 ntBASIC-1.32□□□□□ -2.62
AP3B1O00203 RNU6-208P-201ENST00000362431 107 ntBASIC-1.33□□□□□ -2.62
AP3B1O00203 MIR147A-201ENST00000385079 72 ntBASIC-1.33□□□□□ -2.62
AP3B1O00203 MIR548U-201ENST00000390728 81 ntBASIC-1.33□□□□□ -2.62
AP3B1O00203 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.33□□□□□ -2.62
AP3B1O00203 AC068339.1-201ENST00000526965 141 ntBASIC-1.33□□□□□ -2.62
AP3B1O00203 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.34□□□□□ -2.62
AP3B1O00203 RNY4P3-201ENST00000365254 95 ntBASIC-1.34□□□□□ -2.62
AP3B1O00203 MIR3115-201ENST00000577915 68 ntBASIC-1.34□□□□□ -2.62
AP3B1O00203 RNY3P2-201ENST00000362918 102 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 RNA5SP192-201ENST00000364404 120 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 MIR587-201ENST00000384845 96 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 SNORD90-201ENST00000391145 111 ntBASIC-1.35□□□□□ -2.63
AP3B1O00203 SNORD75.2-201ENST00000408784 58 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms