Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR196A1-201ENST00000388006 70 ntBASIC-1.24□□□□□ -2.61
SMKR1H3BMG3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.24□□□□□ -2.61
SMKR1H3BMG3 MIR548X2-201ENST00000579776 100 ntBASIC-1.24□□□□□ -2.61
SMKR1H3BMG3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.25□□□□□ -2.61
SMKR1H3BMG3 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.25□□□□□ -2.61
SMKR1H3BMG3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.25□□□□□ -2.61
SMKR1H3BMG3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 SNORD95.1-201ENST00000364099 68 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 SNORD116-18-201ENST00000383961 92 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 RNU6-196P-201ENST00000384315 107 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 RNU7-85P-201ENST00000458851 63 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 MIR4694-201ENST00000578534 80 ntBASIC-1.26□□□□□ -2.61
SMKR1H3BMG3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.27□□□□□ -2.61
SMKR1H3BMG3 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.27□□□□□ -2.61
SMKR1H3BMG3 RNY1P7-201ENST00000384743 110 ntBASIC-1.27□□□□□ -2.61
SMKR1H3BMG3 AL513043.2-201ENST00000573941 143 ntBASIC-1.27□□□□□ -2.61
SMKR1H3BMG3 SNORD58C-201ENST00000365223 64 ntBASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 SNORD83B-201ENST00000386745 93 ntBASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 MIR548U-201ENST00000390728 81 ntBASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.28□□□□□ -2.61
SMKR1H3BMG3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-200P-201ENST00000364743 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-394P-201ENST00000410735 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU4-63P-201ENST00000411313 118 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 AC074198.2-201ENST00000508153 258 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-758P-201ENST00000516292 89 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.29□□□□□ -2.62
SMKR1H3BMG3 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.3□□□□□ -2.62
SMKR1H3BMG3 MTND3P2-201ENST00000438452 342 ntBASIC-1.3□□□□□ -2.62
SMKR1H3BMG3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.3□□□□□ -2.62
SMKR1H3BMG3 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.3□□□□□ -2.62
SMKR1H3BMG3 MIR4439-201ENST00000583746 80 ntBASIC-1.3□□□□□ -2.62
SMKR1H3BMG3 RNY3P2-201ENST00000362918 102 ntBASIC-1.31□□□□□ -2.62
SMKR1H3BMG3 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.31□□□□□ -2.62
SMKR1H3BMG3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.31□□□□□ -2.62
SMKR1H3BMG3 MIR3140-201ENST00000583685 90 ntBASIC-1.31□□□□□ -2.62
SMKR1H3BMG3 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.32□□□□□ -2.62
SMKR1H3BMG3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.32□□□□□ -2.62
SMKR1H3BMG3 AC068339.1-201ENST00000526965 141 ntBASIC-1.32□□□□□ -2.62
SMKR1H3BMG3 MIR4679-2-201ENST00000578358 77 ntBASIC-1.32□□□□□ -2.62
SMKR1H3BMG3 MIR3064-201ENST00000581130 66 ntBASIC-1.32□□□□□ -2.62
SMKR1H3BMG3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 RNU6-138P-201ENST00000515952 107 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.33□□□□□ -2.62
SMKR1H3BMG3 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 RNU6-574P-201ENST00000384265 107 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 AC021146.9-201ENST00000512503 156 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 AC104996.3-201ENST00000590718 94 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 U6.96-201ENST00000636425 70 ntBASIC-1.34□□□□□ -2.62
SMKR1H3BMG3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.35□□□□□ -2.63
SMKR1H3BMG3 SNORA24B-201ENST00000384176 131 ntBASIC-1.35□□□□□ -2.63
SMKR1H3BMG3 MIR569-201ENST00000385228 96 ntBASIC-1.35□□□□□ -2.63
SMKR1H3BMG3 AC004792.1-201ENST00000614523 137 ntBASIC-1.35□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 SNORD45B-201ENST00000364617 72 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 RNY4P3-201ENST00000365254 95 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 MIR147A-201ENST00000385079 72 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 MIR124-2-201ENST00000385081 109 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 SNORD4B-201ENST00000459083 72 ntBASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.36□□□□□ -2.63
SMKR1H3BMG3 RNA5SP368-201ENST00000364298 116 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 RNU6-804P-201ENST00000384286 107 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 SNORD64-201ENST00000386683 67 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 AL500527.2-201ENST00000454105 95 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 MIR3144-201ENST00000579460 79 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 MIR3613-201ENST00000579844 87 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 AL035470.1-201ENST00000622571 220 ntBASIC-1.37□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.38□□□□□ -2.63
SMKR1H3BMG3 RNU6-208P-201ENST00000362431 107 ntBASIC-1.38□□□□□ -2.63
SMKR1H3BMG3 MIR548Z-201ENST00000584743 97 ntBASIC-1.38□□□□□ -2.63
SMKR1H3BMG3 AC103810.7-201ENST00000607821 91 ntBASIC-1.38□□□□□ -2.63
SMKR1H3BMG3 MIR7111-201ENST00000619751 72 ntBASIC-1.38□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 RNU6-379P-201ENST00000363813 104 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 RNU6-463P-201ENST00000384340 107 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 MIR548A1-201ENST00000385041 97 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 Z95118.1-201ENST00000421372 247 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.39□□□□□ -2.63
SMKR1H3BMG3 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.4□□□□□ -2.63
SMKR1H3BMG3 AC140658.3-201ENST00000567603 271 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms