Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU2-59P-201ENST00000410482 191 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 Y_RNA.694-201ENST00000516677 117 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 MIR548AG2-201ENST00000581228 64 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 MIR4696-201ENST00000581431 70 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 SNORA9.1-201ENST00000362412 131 ntBASIC0.66□□□□□ -2.3
CCDC85CA6NKD9 RNA5SP266-201ENST00000410273 108 ntBASIC0.66□□□□□ -2.3
CCDC85CA6NKD9 RNA5SP98-201ENST00000363158 137 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.190-201ENST00000363964 101 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 RNU6-287P-201ENST00000516230 98 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 MIR4723-201ENST00000585070 81 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 AC073869.9-201ENST00000641610 120 ntBASIC0.65□□□□□ -2.31
CCDC85CA6NKD9 SNORD114-15-201ENST00000364687 72 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 MTATP6P29-201ENST00000415057 132 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 MIR2113-201ENST00000459007 91 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 RNU6-758P-201ENST00000516292 89 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 RNA5SP67-201ENST00000516422 131 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
CCDC85CA6NKD9 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
CCDC85CA6NKD9 AC114737.2-201ENST00000421583 173 ntBASIC0.63□□□□□ -2.31
CCDC85CA6NKD9 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
CCDC85CA6NKD9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.63□□□□□ -2.31
CCDC85CA6NKD9 RNU6-509P-201ENST00000363519 107 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.220-201ENST00000364244 109 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 MIR519E-201ENST00000385075 84 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 RNU6-935P-201ENST00000410371 100 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 AC026421.1-201ENST00000519101 163 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 RNU1-29P-201ENST00000606574 126 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
CCDC85CA6NKD9 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 MIR548U-201ENST00000390728 81 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.609-201ENST00000410669 89 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 AC093423.1-201ENST00000440817 142 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 AC069271.1-201ENST00000445577 156 ntBASIC0.61□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.239-201ENST00000364444 113 ntBASIC0.6□□□□□ -2.31
CCDC85CA6NKD9 MIR5706-201ENST00000579841 80 ntBASIC0.6□□□□□ -2.31
CCDC85CA6NKD9 MIR3064-201ENST00000581130 66 ntBASIC0.6□□□□□ -2.31
CCDC85CA6NKD9 RNU6-132P-201ENST00000383863 107 ntBASIC0.59□□□□□ -2.31
CCDC85CA6NKD9 Y_RNA.457-201ENST00000384237 111 ntBASIC0.59□□□□□ -2.31
CCDC85CA6NKD9 MIR216B-201ENST00000390186 82 ntBASIC0.59□□□□□ -2.31
CCDC85CA6NKD9 AC104996.3-201ENST00000590718 94 ntBASIC0.59□□□□□ -2.31
CCDC85CA6NKD9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC85CA6NKD9 RNU6-811P-201ENST00000384069 107 ntBASIC0.58□□□□□ -2.32
CCDC85CA6NKD9 MIR1468-201ENST00000410600 86 ntBASIC0.58□□□□□ -2.32
CCDC85CA6NKD9 RNA5SP299-201ENST00000391203 116 ntBASIC0.57□□□□□ -2.32
CCDC85CA6NKD9 AC090625.1-201ENST00000357130 210 ntBASIC0.56□□□□□ -2.32
CCDC85CA6NKD9 MIRLET7F1-201ENST00000362202 87 ntBASIC0.56□□□□□ -2.32
CCDC85CA6NKD9 RNU1-141P-201ENST00000364623 158 ntBASIC0.56□□□□□ -2.32
CCDC85CA6NKD9 RNU6-844P-201ENST00000517175 102 ntBASIC0.56□□□□□ -2.32
CCDC85CA6NKD9 MIR6755-201ENST00000619993 66 ntBASIC0.56□□□□□ -2.32
CCDC85CA6NKD9 U3.27-201ENST00000391237 200 ntBASIC0.55□□□□□ -2.32
CCDC85CA6NKD9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
CCDC85CA6NKD9 SNORD116-22-201ENST00000384430 92 ntBASIC0.54□□□□□ -2.32
CCDC85CA6NKD9 RNU6-1057P-201ENST00000517162 102 ntBASIC0.54□□□□□ -2.32
CCDC85CA6NKD9 MIR4668-201ENST00000582284 70 ntBASIC0.54□□□□□ -2.32
CCDC85CA6NKD9 RNU6-633P-201ENST00000362612 103 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNU6-1131P-201ENST00000364955 107 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNU6-49P-201ENST00000384256 107 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 Y_RNA.491-201ENST00000384417 107 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNY1P7-201ENST00000384743 110 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 Y_RNA.620-201ENST00000411009 88 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNA5SP484-201ENST00000458857 111 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.53□□□□□ -2.32
CCDC85CA6NKD9 RNU6-497P-201ENST00000365316 104 ntBASIC0.52□□□□□ -2.33
CCDC85CA6NKD9 MIR4752-201ENST00000579672 72 ntBASIC0.52□□□□□ -2.33
CCDC85CA6NKD9 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 RNU6-1298P-201ENST00000362456 101 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 RNU6-219P-201ENST00000364728 107 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 MIR451A-201ENST00000385059 72 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 RNA5SP292-201ENST00000390974 118 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 MIR1236-201ENST00000408340 102 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 SNORA70.25-201ENST00000612741 95 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 AC069503.3-201ENST00000618674 145 ntBASIC0.51□□□□□ -2.33
CCDC85CA6NKD9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 RNY4P30-201ENST00000410216 95 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 NAMPTP3-201ENST00000569273 224 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 MIR5190-201ENST00000581537 80 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 MIR4493-201ENST00000584016 73 ntBASIC0.5□□□□□ -2.33
CCDC85CA6NKD9 RNU4-32P-201ENST00000363404 141 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 RNU6-675P-201ENST00000384236 104 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 MT-TY-201ENST00000387409 66 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 SNORD57-201ENST00000448188 72 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 SNORA18.5-201ENST00000516616 101 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 U7.6-201ENST00000610841 64 ntBASIC0.49□□□□□ -2.33
CCDC85CA6NKD9 SNORD110-201ENST00000408189 75 ntBASIC0.48□□□□□ -2.33
CCDC85CA6NKD9 AC006210.1-201ENST00000424882 111 ntBASIC0.48□□□□□ -2.33
CCDC85CA6NKD9 MIR548O2-201ENST00000616090 70 ntBASIC0.48□□□□□ -2.33
CCDC85CA6NKD9 MIR519C-201ENST00000385053 87 ntBASIC0.47□□□□□ -2.33
CCDC85CA6NKD9 AC108740.1-201ENST00000498629 225 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms