Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 SNORA26.2-201ENST00000390922 122 ntBASIC1.08□□□□□ -2.24
SRPK3Q9UPE1 SNORD99-201ENST00000408612 74 ntBASIC1.08□□□□□ -2.24
SRPK3Q9UPE1 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
SRPK3Q9UPE1 TRDV1-202ENST00000621643 102 ntBASIC1.08□□□□□ -2.24
SRPK3Q9UPE1 Y_RNA.221-201ENST00000364248 96 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 RN7SKP12-201ENST00000516275 143 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 RNU6-267P-201ENST00000516714 103 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 RNU6-135P-201ENST00000516769 101 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 AC062037.1-201ENST00000605302 128 ntBASIC1.07□□□□□ -2.24
SRPK3Q9UPE1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 SNORD115-24-201ENST00000363528 82 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 RNU6-820P-201ENST00000384273 107 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 MIR644A-201ENST00000385262 94 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 RNY4P29-201ENST00000410801 97 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 SNORA72.7-201ENST00000516349 94 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 AC011195.1-201ENST00000578177 177 ntBASIC1.06□□□□□ -2.24
SRPK3Q9UPE1 RNU6-633P-201ENST00000362612 103 ntBASIC1.05□□□□□ -2.24
SRPK3Q9UPE1 RNU6-509P-201ENST00000363519 107 ntBASIC1.05□□□□□ -2.24
SRPK3Q9UPE1 AL606490.4-201ENST00000423117 127 ntBASIC1.05□□□□□ -2.24
SRPK3Q9UPE1 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
SRPK3Q9UPE1 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
SRPK3Q9UPE1 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
SRPK3Q9UPE1 Y_RNA.73-201ENST00000362910 113 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 SNORD115-27-201ENST00000364430 82 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 RNU6-811P-201ENST00000384069 107 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 MIR519C-201ENST00000385053 87 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 AC244098.3-201ENST00000424803 96 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 MIR4723-201ENST00000585070 81 ntBASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SRPK3Q9UPE1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
SRPK3Q9UPE1 RNU6-1229P-201ENST00000364295 107 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 MIR548U-201ENST00000390728 81 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 MIR1236-201ENST00000408340 102 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 AC022137.1-201ENST00000483735 151 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 MIR4639-201ENST00000584938 69 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 MIR2909-201ENST00000617113 69 ntBASIC1.02□□□□□ -2.25
SRPK3Q9UPE1 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
SRPK3Q9UPE1 Y_RNA.611-201ENST00000410682 108 ntBASIC1.01□□□□□ -2.25
SRPK3Q9UPE1 RNU7-104P-201ENST00000459398 79 ntBASIC1.01□□□□□ -2.25
SRPK3Q9UPE1 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
SRPK3Q9UPE1 U6.100-201ENST00000636230 99 ntBASIC1.01□□□□□ -2.25
SRPK3Q9UPE1 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 RNA5SP403-201ENST00000363598 108 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 SNORD115-37-201ENST00000363768 82 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 Y_RNA.388-201ENST00000383919 113 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 SNORD101-201ENST00000384027 73 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 Y_RNA.596-201ENST00000410462 109 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1□□□□□ -2.25
SRPK3Q9UPE1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
SRPK3Q9UPE1 MIR548BB-201ENST00000626714 66 ntBASIC1□□□□□ -2.25
SRPK3Q9UPE1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 MIRLET7F1-201ENST00000362202 87 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 MIR18A-201ENST00000362310 71 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 SNORD18A-201ENST00000363753 72 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 RNU6-497P-201ENST00000365316 104 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 RNU6-242P-201ENST00000384359 107 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 MIR3064-201ENST00000581130 66 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
SRPK3Q9UPE1 RNU6-132P-201ENST00000383863 107 ntBASIC0.98□□□□□ -2.25
SRPK3Q9UPE1 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
SRPK3Q9UPE1 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
SRPK3Q9UPE1 MIR5588-201ENST00000581890 63 ntBASIC0.98□□□□□ -2.25
SRPK3Q9UPE1 AC244669.1-204ENST00000621564 178 ntBASIC0.98□□□□□ -2.25
SRPK3Q9UPE1 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 SNORA9.1-201ENST00000362412 131 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 Y_RNA.239-201ENST00000364444 113 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 SNORD115-44-201ENST00000365391 82 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 Y_RNA.426-201ENST00000384068 113 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
SRPK3Q9UPE1 MIR409-201ENST00000362237 79 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 Y_RNA.491-201ENST00000384417 107 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 RNU6-1152P-201ENST00000384576 107 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 RNA5SP292-201ENST00000390974 118 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 AC093729.1-201ENST00000513074 128 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 MIR5589-201ENST00000579442 60 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 MIR4696-201ENST00000581431 70 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 MIR4802-201ENST00000581881 80 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.96□□□□□ -2.26
SRPK3Q9UPE1 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 RNA5SP173-201ENST00000364857 136 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 RNU6-979P-201ENST00000383896 107 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 MIR548L-201ENST00000408303 86 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 MIR1468-201ENST00000410600 86 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 RNU7-153P-201ENST00000516455 62 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 MTRNR2L2-201ENST00000604882 87 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 AC067863.3-201ENST00000624172 122 ntBASIC0.95□□□□□ -2.26
SRPK3Q9UPE1 AC006160.2-201ENST00000637708 154 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms