Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNY1P7-201ENST00000384743 110 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 MIR548L-201ENST00000408303 86 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.648-201ENST00000459455 110 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNA5SP227-201ENST00000516184 113 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNA5SP268-201ENST00000516828 124 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 AL109933.3-201ENST00000619095 188 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 SNORA36.1-201ENST00000363424 132 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 RNU6-716P-201ENST00000365621 103 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 TRDV1-202ENST00000621643 102 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
CCM2LQ9NUG4 SNORA40.8-201ENST00000411034 126 ntBASIC0.68□□□□□ -2.3
CCM2LQ9NUG4 RN7SKP12-201ENST00000516275 143 ntBASIC0.68□□□□□ -2.3
CCM2LQ9NUG4 RNU7-13P-201ENST00000516413 62 ntBASIC0.68□□□□□ -2.3
CCM2LQ9NUG4 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
CCM2LQ9NUG4 SNORD116-10-201ENST00000363791 102 ntBASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.283-201ENST00000364798 112 ntBASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 MIR8087-201ENST00000612745 78 ntBASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 U6.100-201ENST00000636230 99 ntBASIC0.67□□□□□ -2.3
CCM2LQ9NUG4 SNORD115-44-201ENST00000365391 82 ntBASIC0.66□□□□□ -2.3
CCM2LQ9NUG4 RNU6-519P-201ENST00000410590 108 ntBASIC0.66□□□□□ -2.3
CCM2LQ9NUG4 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
CCM2LQ9NUG4 RNA5SP257-201ENST00000363023 116 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 RNU6-49P-201ENST00000384256 107 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 AC026421.1-201ENST00000519101 163 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 SNORA25.18-201ENST00000607153 114 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 MIR7107-201ENST00000611489 80 ntBASIC0.65□□□□□ -2.31
CCM2LQ9NUG4 Y_RNA.220-201ENST00000364244 109 ntBASIC0.64□□□□□ -2.31
CCM2LQ9NUG4 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
CCM2LQ9NUG4 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
CCM2LQ9NUG4 RNU6-65P-201ENST00000516332 98 ntBASIC0.64□□□□□ -2.31
CCM2LQ9NUG4 MIR4536-1-201ENST00000583537 88 ntBASIC0.64□□□□□ -2.31
CCM2LQ9NUG4 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
CCM2LQ9NUG4 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
CCM2LQ9NUG4 RNU6-726P-201ENST00000364680 107 ntBASIC0.63□□□□□ -2.31
CCM2LQ9NUG4 SNORD41.1-201ENST00000391000 69 ntBASIC0.63□□□□□ -2.31
CCM2LQ9NUG4 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
CCM2LQ9NUG4 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
CCM2LQ9NUG4 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
CCM2LQ9NUG4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.62□□□□□ -2.31
CCM2LQ9NUG4 RNU7-74P-201ENST00000459104 62 ntBASIC0.62□□□□□ -2.31
CCM2LQ9NUG4 RNU6-75P-201ENST00000515944 104 ntBASIC0.62□□□□□ -2.31
CCM2LQ9NUG4 MIR330-201ENST00000362196 94 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 RNU6-1298P-201ENST00000362456 101 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 RNU4-32P-201ENST00000363404 141 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 SNORD4B-201ENST00000459083 72 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 Y_RNA.694-201ENST00000516677 117 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 RNA5SP170-201ENST00000517150 101 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 MIR5582-201ENST00000579697 68 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
CCM2LQ9NUG4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.6□□□□□ -2.31
CCM2LQ9NUG4 MIR3920-201ENST00000581751 86 ntBASIC0.6□□□□□ -2.31
CCM2LQ9NUG4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCM2LQ9NUG4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.59□□□□□ -2.31
CCM2LQ9NUG4 RNU6-132P-201ENST00000383863 107 ntBASIC0.59□□□□□ -2.31
CCM2LQ9NUG4 SNORD101-201ENST00000384027 73 ntBASIC0.59□□□□□ -2.31
CCM2LQ9NUG4 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
CCM2LQ9NUG4 RNU6-863P-201ENST00000515989 104 ntBASIC0.58□□□□□ -2.32
CCM2LQ9NUG4 RNU6-844P-201ENST00000517175 102 ntBASIC0.58□□□□□ -2.32
CCM2LQ9NUG4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.58□□□□□ -2.32
CCM2LQ9NUG4 AL162376.1-201ENST00000624117 175 ntBASIC0.58□□□□□ -2.32
CCM2LQ9NUG4 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 RNU6-402P-201ENST00000410678 103 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 RNU6-287P-201ENST00000516230 98 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 RNA5SP395-201ENST00000516567 118 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 MIR548AG2-201ENST00000581228 64 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 MIR4696-201ENST00000581431 70 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 AC073869.9-201ENST00000641610 120 ntBASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CCM2LQ9NUG4 RNU6-664P-201ENST00000362381 107 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 RNU2-59P-201ENST00000410482 191 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 MIR2113-201ENST00000459007 91 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 MIR4752-201ENST00000579672 72 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 MIR4668-201ENST00000582284 70 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
CCM2LQ9NUG4 RNU6-509P-201ENST00000363519 107 ntBASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 RNU6-811P-201ENST00000384069 107 ntBASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 AC069271.1-201ENST00000445577 156 ntBASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 RNU6-267P-201ENST00000516714 103 ntBASIC0.55□□□□□ -2.32
CCM2LQ9NUG4 MIR3064-201ENST00000581130 66 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 437 ms