Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.25□□□□□ -2.61
CISHQ9NSE2 RNU6-479P-201ENST00000516348 105 ntBASIC-1.25□□□□□ -2.61
CISHQ9NSE2 AC068339.1-201ENST00000526965 141 ntBASIC-1.25□□□□□ -2.61
CISHQ9NSE2 MIR4680-201ENST00000580906 66 ntBASIC-1.25□□□□□ -2.61
CISHQ9NSE2 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 RNU7-134P-201ENST00000458997 64 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 MIR4795-201ENST00000584182 89 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 AL353803.5-201ENST00000599815 141 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 AC132825.6-201ENST00000638861 357 ntBASIC-1.26□□□□□ -2.61
CISHQ9NSE2 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 RNU6-363P-201ENST00000362895 105 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 MT-TW-201ENST00000387382 68 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 FGF7P7-201ENST00000514120 227 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 RNA5SP461-201ENST00000516451 104 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 RNU6-988P-201ENST00000519081 107 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.27□□□□□ -2.61
CISHQ9NSE2 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
CISHQ9NSE2 MIR6844-201ENST00000637122 62 ntBASIC-1.27□□□□□ -2.61
CISHQ9NSE2 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 SNORD18B-201ENST00000365659 72 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 MIR29B1-201ENST00000385015 81 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 MIR759-201ENST00000390224 91 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 AC021146.9-201ENST00000512503 156 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 MIR3646-201ENST00000578301 84 ntBASIC-1.28□□□□□ -2.61
CISHQ9NSE2 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 SNORA24B-201ENST00000384176 131 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 AC107027.2-201ENST00000512197 115 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 RNU6-706P-201ENST00000517229 104 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 U6.96-201ENST00000636425 70 ntBASIC-1.29□□□□□ -2.62
CISHQ9NSE2 MTND4P29-201ENST00000503122 1372 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 SNORA63.2-201ENST00000362603 126 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 RNU6-746P-201ENST00000384112 109 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 RNU7-85P-201ENST00000458851 63 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 AC026421.1-201ENST00000519101 163 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 MIR3140-201ENST00000583685 90 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 MIR6818-201ENST00000621576 65 ntBASIC-1.3□□□□□ -2.62
CISHQ9NSE2 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 MIR548D2-201ENST00000384955 97 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 SNORD127-201ENST00000458892 86 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 SNORD63.1-201ENST00000516178 80 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 AL442128.1-201ENST00000615151 90 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 AC025521.1-201ENST00000621624 286 ntBASIC-1.31□□□□□ -2.62
CISHQ9NSE2 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 SNORD50.2-201ENST00000365465 70 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 RNU6-132P-201ENST00000383863 107 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 RNU7-24P-201ENST00000458867 62 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 RNA5SP476-201ENST00000516613 103 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
CISHQ9NSE2 SNORA26.4-201ENST00000391188 123 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 RNU6-65P-201ENST00000516332 98 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 MIR4536-1-201ENST00000583537 88 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 MIR3658-201ENST00000636291 56 ntBASIC-1.33□□□□□ -2.62
CISHQ9NSE2 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 SNORD115-33-201ENST00000363723 82 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 RNU6-409P-201ENST00000384114 104 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 RNU6-918P-201ENST00000391219 106 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 MIR548P-201ENST00000408336 84 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 MIR3121-201ENST00000579680 77 ntBASIC-1.34□□□□□ -2.62
CISHQ9NSE2 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 MIR548A1-201ENST00000385041 97 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 MIR8485-201ENST00000401372 91 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 MIR1302-6-201ENST00000408466 90 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 RNU6-985P-201ENST00000410182 104 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 RNU7-121P-201ENST00000516604 62 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 MIR8062-201ENST00000621515 85 ntBASIC-1.35□□□□□ -2.63
CISHQ9NSE2 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 RNU6-312P-201ENST00000364629 107 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 RNU6-713P-201ENST00000384761 107 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 MIR527-201ENST00000385244 85 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms