Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 RNU6-800P-201ENST00000384473 103 ntBASIC1.52□□□□□ -2.17
LTBP3Q9NS15 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
LTBP3Q9NS15 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LTBP3Q9NS15 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
LTBP3Q9NS15 RN7SL793P-201ENST00000583259 296 ntBASIC1.52□□□□□ -2.17
LTBP3Q9NS15 U6.111-201ENST00000636093 83 ntBASIC1.52□□□□□ -2.17
LTBP3Q9NS15 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RNU6-330P-201ENST00000363015 107 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 SNORD115-31-201ENST00000365318 82 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RNU6-1051P-201ENST00000365471 102 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 MIR154-201ENST00000385243 84 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 SNORD100-201ENST00000408573 76 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RNU7-195P-201ENST00000458793 62 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 TRAJ51-201ENST00000504127 63 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RNA5SP476-201ENST00000516613 103 ntBASIC1.51□□□□□ -2.17
LTBP3Q9NS15 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.51□□□□□ -2.17
LTBP3Q9NS15 RNA5SP327-201ENST00000362494 101 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.42-201ENST00000362660 108 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 SNORA8.1-201ENST00000384250 140 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.536-201ENST00000384621 113 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 MIR942-201ENST00000401111 86 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
LTBP3Q9NS15 MIR1-1-201ENST00000362147 71 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.207-201ENST00000364142 106 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 RNU6-154P-201ENST00000384306 106 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 MIR519A1-201ENST00000385257 85 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LTBP3Q9NS15 RNU6-663P-201ENST00000391105 106 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 AL606490.4-201ENST00000423117 127 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 RNU7-40P-201ENST00000516397 64 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 RNU6-765P-201ENST00000516916 99 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 TRDV1-202ENST00000621643 102 ntBASIC1.49□□□□□ -2.17
LTBP3Q9NS15 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
LTBP3Q9NS15 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 RNU6-340P-201ENST00000364005 107 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.239-201ENST00000364444 113 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.371-201ENST00000365591 113 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 RNU6-471P-201ENST00000383944 106 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 RNU6-291P-201ENST00000384720 107 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 MIR938-201ENST00000401216 83 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 RNU7-156P-201ENST00000517214 74 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 MIR4676-201ENST00000583078 72 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 AC013244.2-201ENST00000603396 103 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
LTBP3Q9NS15 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 RNY4P3-201ENST00000365254 95 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 RNU6-364P-201ENST00000384387 107 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 Y_RNA.809-201ENST00000516058 95 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 MIR548H5-201ENST00000580314 60 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 MIR4696-201ENST00000581431 70 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 RNU7-10P-201ENST00000607194 63 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 AL136317.1-201ENST00000612653 226 ntBASIC1.47□□□□□ -2.17
LTBP3Q9NS15 RNU6-664P-201ENST00000362381 107 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 RNA5SP457-201ENST00000363657 124 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 MIR100-201ENST00000385259 80 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 RNU6-977P-201ENST00000516411 103 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 MIR3140-201ENST00000583685 90 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.46□□□□□ -2.18
LTBP3Q9NS15 AC027335.2-201ENST00000624030 375 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 U6.100-201ENST00000636230 99 ntBASIC1.46□□□□□ -2.18
LTBP3Q9NS15 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LTBP3Q9NS15 Y_RNA.56-201ENST00000362798 112 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 SNORD101-201ENST00000384027 73 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 AC092628.1-201ENST00000436250 252 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
LTBP3Q9NS15 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
LTBP3Q9NS15 Y_RNA.13-201ENST00000362403 112 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 RNU6-681P-201ENST00000364012 104 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 MIR200A-201ENST00000384875 90 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 Y_RNA.606-201ENST00000410579 103 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 AC087343.1-201ENST00000477341 475 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 MIR3675-201ENST00000583661 73 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 AC005520.4-201ENST00000604337 90 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 MTRNR2L2-201ENST00000604882 87 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.44□□□□□ -2.18
LTBP3Q9NS15 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
LTBP3Q9NS15 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
LTBP3Q9NS15 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
LTBP3Q9NS15 MIR2113-201ENST00000459007 91 ntBASIC1.43□□□□□ -2.18
LTBP3Q9NS15 Y_RNA.697-201ENST00000516776 113 ntBASIC1.43□□□□□ -2.18
LTBP3Q9NS15 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
LTBP3Q9NS15 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LTBP3Q9NS15 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LTBP3Q9NS15 RNU1-119P-201ENST00000391122 165 ntBASIC1.42□□□□□ -2.18
LTBP3Q9NS15 AC097635.1-201ENST00000450678 155 ntBASIC1.42□□□□□ -2.18
LTBP3Q9NS15 MIR3122-201ENST00000577243 73 ntBASIC1.42□□□□□ -2.18
LTBP3Q9NS15 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
LTBP3Q9NS15 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LTBP3Q9NS15 SNORA24B-201ENST00000384176 131 ntBASIC1.41□□□□□ -2.18
LTBP3Q9NS15 AC093423.1-201ENST00000440817 142 ntBASIC1.41□□□□□ -2.18
LTBP3Q9NS15 HAR1A.1-201ENST00000459583 118 ntBASIC1.41□□□□□ -2.18
LTBP3Q9NS15 AC097510.1-201ENST00000510945 133 ntBASIC1.41□□□□□ -2.18
LTBP3Q9NS15 RNU6-1110P-201ENST00000516462 101 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms