Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 ELOCP20-201ENST00000422460 345 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 MIR664B-201ENST00000626756 61 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 SNORA20.3-201ENST00000516880 132 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 MIR3149-201ENST00000584629 83 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 AL512310.12-203ENST00000640543 90 ntBASIC-1.07□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 SNORD38.1-201ENST00000363863 68 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 MIR507-201ENST00000385234 94 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-616P-201ENST00000384353 107 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-578P-201ENST00000390980 103 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 AL513043.2-201ENST00000573941 143 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.08□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-228P-201ENST00000362700 106 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 SNORD116-2-201ENST00000384274 95 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 SNORD19-201ENST00000391191 68 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 AC025521.1-201ENST00000621624 286 ntBASIC-1.09□□□□□ -2.58
KIAA1549Q9HCM3 MIR335-201ENST00000362173 94 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-978P-201ENST00000364371 103 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 SNORA24B-201ENST00000384176 131 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 MIR521-2-201ENST00000384818 87 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 MIR759-201ENST00000390224 91 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 snoU13.17-201ENST00000458802 104 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 MIR3121-201ENST00000579680 77 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 SNORA25.1-201ENST00000362326 128 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 MIR548A1-201ENST00000385041 97 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 MIR3140-201ENST00000583685 90 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 AC002553.4-201ENST00000616896 331 ntBASIC-1.1□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MIR548G-201ENST00000408442 89 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MIR1277-201ENST00000408536 78 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-168P-201ENST00000516189 101 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MIR4643-201ENST00000577473 78 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MIR4282-201ENST00000583613 67 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MTND4LP32-201ENST00000636111 270 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 MIR3688-2-201ENST00000636963 87 ntBASIC-1.11□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-823P-201ENST00000391042 103 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 MTATP6P21-201ENST00000440681 189 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 AC090616.4-201ENST00000448026 115 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 MIR4441-201ENST00000582623 100 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 AC005520.4-201ENST00000604337 90 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 U6.96-201ENST00000636425 70 ntBASIC-1.12□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.13□□□□□ -2.59
KIAA1549Q9HCM3 Z83846.1-201ENST00000446798 265 ntBASIC-1.13□□□□□ -2.59
KIAA1549Q9HCM3 AL691482.2-201ENST00000457453 84 ntBASIC-1.13□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.13□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.13□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR487B-201ENST00000385021 84 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR548U-201ENST00000390728 81 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR3646-201ENST00000578301 84 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 AC080013.6-201ENST00000606185 215 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms