Protein–RNA interactions for Protein: Q9H2Z4

NKX2-4, Homeobox protein Nkx-2.4, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4Q9H2Z4 RNU6-242P-201ENST00000384359 107 ntBASIC1.1□□□□□ -2.23
NKX2-4Q9H2Z4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.09□□□□□ -2.23
NKX2-4Q9H2Z4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.09□□□□□ -2.23
NKX2-4Q9H2Z4 MIR1273G-201ENST00000577677 100 ntBASIC1.09□□□□□ -2.23
NKX2-4Q9H2Z4 MIR5588-201ENST00000581890 63 ntBASIC1.09□□□□□ -2.23
NKX2-4Q9H2Z4 RNU6-497P-201ENST00000365316 104 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 U6.100-201ENST00000636230 99 ntBASIC1.08□□□□□ -2.24
NKX2-4Q9H2Z4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 RNA5SP173-201ENST00000364857 136 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 SNORD101-201ENST00000384027 73 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 RNU7-104P-201ENST00000459398 79 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 MIR4639-201ENST00000584938 69 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 AC104996.3-201ENST00000590718 94 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-664P-201ENST00000362381 107 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 RNA5SP403-201ENST00000363598 108 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 RNU4-45P-201ENST00000365469 141 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-132P-201ENST00000383863 107 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-1152P-201ENST00000384576 107 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 RNU7-13P-201ENST00000516413 62 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 MIR4714-201ENST00000580728 77 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 MIR3064-201ENST00000581130 66 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 AL590095.2-201ENST00000604136 117 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
NKX2-4Q9H2Z4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 SNORD115-44-201ENST00000365391 82 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-979P-201ENST00000383896 107 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 SNORD28-201ENST00000384706 75 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 AC093729.1-201ENST00000513074 128 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 RNU7-161P-201ENST00000517289 62 ntBASIC1.05□□□□□ -2.24
NKX2-4Q9H2Z4 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 SNORD18A-201ENST00000363753 72 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 RNA5SP292-201ENST00000390974 118 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 RNU6-592P-201ENST00000411333 103 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 RNU7-153P-201ENST00000516455 62 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 MIR4696-201ENST00000581431 70 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 AC244669.1-204ENST00000621564 178 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 AC067863.3-201ENST00000624172 122 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 AC006160.2-201ENST00000637708 154 ntBASIC1.04□□□□□ -2.24
NKX2-4Q9H2Z4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 RNA5SP457-201ENST00000363657 124 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 SNORA18.5-201ENST00000516616 101 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 MIR4796-201ENST00000580742 81 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.03□□□□□ -2.24
NKX2-4Q9H2Z4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
NKX2-4Q9H2Z4 RNU6-573P-201ENST00000383938 106 ntBASIC1.02□□□□□ -2.25
NKX2-4Q9H2Z4 MIR548L-201ENST00000408303 86 ntBASIC1.01□□□□□ -2.25
NKX2-4Q9H2Z4 RNU7-171P-201ENST00000459581 62 ntBASIC1.01□□□□□ -2.25
NKX2-4Q9H2Z4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.01□□□□□ -2.25
NKX2-4Q9H2Z4 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
NKX2-4Q9H2Z4 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
NKX2-4Q9H2Z4 Y_RNA.607-201ENST00000410597 98 ntBASIC1□□□□□ -2.25
NKX2-4Q9H2Z4 RNU6-1057P-201ENST00000517162 102 ntBASIC1□□□□□ -2.25
NKX2-4Q9H2Z4 RNA5SP47-201ENST00000517230 109 ntBASIC1□□□□□ -2.25
NKX2-4Q9H2Z4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 RNU6-935P-201ENST00000410371 100 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 RNU6-287P-201ENST00000516230 98 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 SNORA25.13-201ENST00000516395 103 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 MIR6513-201ENST00000621188 64 ntBASIC0.99□□□□□ -2.25
NKX2-4Q9H2Z4 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
NKX2-4Q9H2Z4 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
NKX2-4Q9H2Z4 RNA5SP330-201ENST00000517096 96 ntBASIC0.98□□□□□ -2.25
NKX2-4Q9H2Z4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.98□□□□□ -2.25
NKX2-4Q9H2Z4 MIR3920-201ENST00000581751 86 ntBASIC0.98□□□□□ -2.25
NKX2-4Q9H2Z4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
NKX2-4Q9H2Z4 AC140658.3-201ENST00000567603 271 ntBASIC0.97□□□□□ -2.25
NKX2-4Q9H2Z4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.97□□□□□ -2.25
NKX2-4Q9H2Z4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
NKX2-4Q9H2Z4 Y_RNA.219-201ENST00000364232 113 ntBASIC0.96□□□□□ -2.26
NKX2-4Q9H2Z4 MIR936-201ENST00000401264 98 ntBASIC0.96□□□□□ -2.26
NKX2-4Q9H2Z4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.96□□□□□ -2.26
NKX2-4Q9H2Z4 MIR1245B-201ENST00000636115 69 ntBASIC0.96□□□□□ -2.26
NKX2-4Q9H2Z4 SNORD114-23-201ENST00000363536 72 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 RNU6-716P-201ENST00000365621 103 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 Y_RNA.437-201ENST00000384113 113 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 MIR451A-201ENST00000385059 72 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 MIR2113-201ENST00000459007 91 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 RNU7-74P-201ENST00000459104 62 ntBASIC0.95□□□□□ -2.26
NKX2-4Q9H2Z4 RNA5SP94-201ENST00000516917 108 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms