Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC098826.2-201ENST00000452011 651 ntBASIC-4.77□□□□□ -3.17
VPS13AQ96RL7 Y_RNA.691-201ENST00000516611 103 ntBASIC-4.77□□□□□ -3.17
VPS13AQ96RL7 RNU6-297P-201ENST00000384636 107 ntBASIC-4.77□□□□□ -3.17
VPS13AQ96RL7 RNU6-144P-201ENST00000383951 107 ntBASIC-4.78□□□□□ -3.17
VPS13AQ96RL7 AC005014.2-201ENST00000607795 599 ntBASIC-4.78□□□□□ -3.17
VPS13AQ96RL7 SNORA18.5-201ENST00000516616 101 ntBASIC-4.78□□□□□ -3.18
VPS13AQ96RL7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-4.78□□□□□ -3.18
VPS13AQ96RL7 RNU4-68P-201ENST00000364314 141 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 Y_RNA.542-201ENST00000384641 111 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 RNU6-493P-201ENST00000391321 108 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 RNU6-521P-201ENST00000516663 105 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 RNA5SP136-201ENST00000410906 107 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 MIR4659A-201ENST00000580269 81 ntBASIC-4.79□□□□□ -3.18
VPS13AQ96RL7 MIR545-201ENST00000385085 106 ntBASIC-4.8□□□□□ -3.18
VPS13AQ96RL7 AL593851.1-201ENST00000426171 157 ntBASIC-4.8□□□□□ -3.18
VPS13AQ96RL7 SNORD115-47-201ENST00000391226 86 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 RNU7-85P-201ENST00000458851 63 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 RNA5SP215-201ENST00000363440 122 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 MTCO3P23-201ENST00000561363 289 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 RNU5E-4P-201ENST00000364931 120 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 RNU6-1113P-201ENST00000384348 107 ntBASIC-4.81□□□□□ -3.18
VPS13AQ96RL7 MIR558-201ENST00000384920 94 ntBASIC-4.82□□□□□ -3.18
VPS13AQ96RL7 AC090425.1-201ENST00000610007 140 ntBASIC-4.82□□□□□ -3.18
VPS13AQ96RL7 SNORD38.1-201ENST00000363863 68 ntBASIC-4.82□□□□□ -3.18
VPS13AQ96RL7 RNU6-616P-201ENST00000384353 107 ntBASIC-4.82□□□□□ -3.18
VPS13AQ96RL7 RNU6-383P-201ENST00000410864 94 ntBASIC-4.82□□□□□ -3.18
VPS13AQ96RL7 MIR1-2-201ENST00000384961 85 ntBASIC-4.83□□□□□ -3.18
VPS13AQ96RL7 AL365205.2-201ENST00000594586 68 ntBASIC-4.83□□□□□ -3.18
VPS13AQ96RL7 SNORD12B-201ENST00000410433 91 ntBASIC-4.84□□□□□ -3.18
VPS13AQ96RL7 RNU6-1301P-201ENST00000362724 104 ntBASIC-4.85□□□□□ -3.19
VPS13AQ96RL7 RNA5SP173-201ENST00000364857 136 ntBASIC-4.85□□□□□ -3.19
VPS13AQ96RL7 SNORD50.1-201ENST00000362987 71 ntBASIC-4.86□□□□□ -3.19
VPS13AQ96RL7 Y_RNA.399-201ENST00000383955 105 ntBASIC-4.86□□□□□ -3.19
VPS13AQ96RL7 Y_RNA.672-201ENST00000516289 104 ntBASIC-4.86□□□□□ -3.19
VPS13AQ96RL7 SNORD116-30-201ENST00000516468 85 ntBASIC-4.86□□□□□ -3.19
VPS13AQ96RL7 RNU6-606P-201ENST00000384721 111 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 MTCO2P24-201ENST00000515611 426 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 RNU6-155P-201ENST00000516347 100 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 RNU4-18P-201ENST00000516751 149 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 MTCO2P30-201ENST00000503662 364 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 Y_RNA.688-201ENST00000516565 95 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 AC090617.9-201ENST00000623751 147 ntBASIC-4.87□□□□□ -3.19
VPS13AQ96RL7 RNU6-776P-201ENST00000364403 104 ntBASIC-4.88□□□□□ -3.19
VPS13AQ96RL7 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.88□□□□□ -3.19
VPS13AQ96RL7 RNU6-627P-201ENST00000364032 102 ntBASIC-4.88□□□□□ -3.19
VPS13AQ96RL7 RNU6-1005P-201ENST00000384519 107 ntBASIC-4.88□□□□□ -3.19
VPS13AQ96RL7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-4.88□□□□□ -3.19
VPS13AQ96RL7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.89□□□□□ -3.19
VPS13AQ96RL7 MTND1P12-201ENST00000455231 147 ntBASIC-4.89□□□□□ -3.19
VPS13AQ96RL7 RNA5SP153-201ENST00000516498 76 ntBASIC-4.9□□□□□ -3.19
VPS13AQ96RL7 MIR3942-201ENST00000585264 109 ntBASIC-4.9□□□□□ -3.19
VPS13AQ96RL7 RNU6-103P-201ENST00000363686 107 ntBASIC-4.91□□□□□ -3.19
VPS13AQ96RL7 AL513043.2-201ENST00000573941 143 ntBASIC-4.91□□□□□ -3.19
VPS13AQ96RL7 MIR320C1-201ENST00000408566 88 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 SCARNA24.1-201ENST00000516465 137 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 MIR548Z-201ENST00000584743 97 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 AC024933.1-201ENST00000608472 348 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 RNU6-982P-201ENST00000516216 102 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 RNU6-1271P-201ENST00000517049 105 ntBASIC-4.92□□□□□ -3.2
VPS13AQ96RL7 uc_338.11-201ENST00000619132 160 ntBASIC-4.93□□□□□ -3.2
VPS13AQ96RL7 RNU7-164P-201ENST00000459221 62 ntBASIC-4.93□□□□□ -3.2
VPS13AQ96RL7 AC138907.4-201ENST00000570107 226 ntBASIC-4.93□□□□□ -3.2
VPS13AQ96RL7 SNORD56.2-201ENST00000363242 71 ntBASIC-4.94□□□□□ -3.2
VPS13AQ96RL7 Y_RNA.706-201ENST00000516933 99 ntBASIC-4.94□□□□□ -3.2
VPS13AQ96RL7 RNU6-1205P-201ENST00000363625 106 ntBASIC-4.95□□□□□ -3.2
VPS13AQ96RL7 RNU6-379P-201ENST00000363813 104 ntBASIC-4.95□□□□□ -3.2
VPS13AQ96RL7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-4.95□□□□□ -3.2
VPS13AQ96RL7 SNORD113-8-201ENST00000363497 74 ntBASIC-4.96□□□□□ -3.2
VPS13AQ96RL7 Y_RNA.383-201ENST00000383855 97 ntBASIC-4.96□□□□□ -3.2
VPS13AQ96RL7 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.96□□□□□ -3.2
VPS13AQ96RL7 AC082651.2-201ENST00000496833 166 ntBASIC-4.97□□□□□ -3.2
VPS13AQ96RL7 SNORA7.5-201ENST00000410672 110 ntBASIC-4.97□□□□□ -3.21
VPS13AQ96RL7 RNU6-1068P-201ENST00000410958 103 ntBASIC-4.98□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.72-201ENST00000362894 103 ntBASIC-4.98□□□□□ -3.21
VPS13AQ96RL7 RNU6-763P-201ENST00000390865 106 ntBASIC-4.98□□□□□ -3.21
VPS13AQ96RL7 RNU6-1329P-201ENST00000365664 107 ntBASIC-4.99□□□□□ -3.21
VPS13AQ96RL7 RNU6-1149P-201ENST00000516810 97 ntBASIC-4.99□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.99□□□□□ -3.21
VPS13AQ96RL7 AC083798.1-201ENST00000472671 131 ntBASIC-4.99□□□□□ -3.21
VPS13AQ96RL7 RNU7-123P-201ENST00000515911 60 ntBASIC-5□□□□□ -3.21
VPS13AQ96RL7 TIMM9P2-201ENST00000419324 266 ntBASIC-5□□□□□ -3.21
VPS13AQ96RL7 RNU6-408P-201ENST00000515910 100 ntBASIC-5□□□□□ -3.21
VPS13AQ96RL7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-5□□□□□ -3.21
VPS13AQ96RL7 MIR494-201ENST00000349529 81 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 RNU6-1013P-201ENST00000384180 107 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 MIR624-201ENST00000385217 97 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 SNORD116.2-201ENST00000391251 93 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 MIR3118-1-201ENST00000581787 76 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 MTCO2P19-201ENST00000427513 598 ntBASIC-5.01□□□□□ -3.21
VPS13AQ96RL7 RNU6-636P-201ENST00000384598 107 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 SNORA40B-201ENST00000385573 128 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 MT-TW-201ENST00000387382 68 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 AP003181.2-201ENST00000528941 181 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 MIR548AB-201ENST00000584917 84 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 U6.92-201ENST00000636464 89 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 MIR367-201ENST00000362299 68 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 RNU6-1213P-201ENST00000517075 94 ntBASIC-5.02□□□□□ -3.21
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms