Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNA5SP292-201ENST00000390974 118 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 RNU6-243P-201ENST00000391140 107 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 AC097635.1-201ENST00000450678 155 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 RNU7-153P-201ENST00000516455 62 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 MIR5588-201ENST00000581890 63 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 U6.100-201ENST00000636230 99 ntBASIC0.84□□□□□ -2.27
ATP2A3Q93084 MIRLET7F1-201ENST00000362202 87 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNU4-32P-201ENST00000363404 141 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNY1P1-201ENST00000364372 112 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNU6-979P-201ENST00000383896 107 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNU6-787P-201ENST00000384032 107 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNU6-524P-201ENST00000384270 107 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 AC244505.6-201ENST00000452829 130 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 RNU6-1265P-201ENST00000516342 103 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 SNORA72.7-201ENST00000516349 94 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 TRDV1-202ENST00000621643 102 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 MIR924-201ENST00000638017 53 ntBASIC0.83□□□□□ -2.28
ATP2A3Q93084 SNORD90-201ENST00000391145 111 ntBASIC0.82□□□□□ -2.28
ATP2A3Q93084 Y_RNA.611-201ENST00000410682 108 ntBASIC0.82□□□□□ -2.28
ATP2A3Q93084 AC006160.2-201ENST00000637708 154 ntBASIC0.82□□□□□ -2.28
ATP2A3Q93084 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.82□□□□□ -2.28
ATP2A3Q93084 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 RNU7-161P-201ENST00000517289 62 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 AC138869.1-201ENST00000568623 124 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 IGLL4P-201ENST00000614590 133 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 MIR1245B-201ENST00000636115 69 ntBASIC0.81□□□□□ -2.28
ATP2A3Q93084 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ATP2A3Q93084 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNA5SP117-201ENST00000365294 118 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNU6-820P-201ENST00000384273 107 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNU6-466P-201ENST00000391224 103 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 Y_RNA.681-201ENST00000516445 113 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 MIR3612-201ENST00000579753 87 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 MIR3064-201ENST00000581130 66 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNU7-10P-201ENST00000607194 63 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
ATP2A3Q93084 RNY1P8-201ENST00000383970 114 ntBASIC0.79□□□□□ -2.28
ATP2A3Q93084 MIR4536-1-201ENST00000583537 88 ntBASIC0.79□□□□□ -2.28
ATP2A3Q93084 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
ATP2A3Q93084 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
ATP2A3Q93084 SNORD115-24-201ENST00000363528 82 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 RNA5SP403-201ENST00000363598 108 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 Y_RNA.433-201ENST00000384089 102 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 MIR519C-201ENST00000385053 87 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ATP2A3Q93084 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
ATP2A3Q93084 AC104996.3-201ENST00000590718 94 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
ATP2A3Q93084 RNU6-228P-201ENST00000362700 106 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 SNORD18A-201ENST00000363753 72 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNU6-1276P-201ENST00000365372 104 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNU4-45P-201ENST00000365469 141 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNU6-811P-201ENST00000384069 107 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 RNU6-65P-201ENST00000516332 98 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 MIR548AG2-201ENST00000581228 64 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 MIR4696-201ENST00000581431 70 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 MTRNR2L2-201ENST00000604882 87 ntBASIC0.77□□□□□ -2.29
ATP2A3Q93084 Y_RNA.174-201ENST00000363781 105 ntBASIC0.76□□□□□ -2.29
ATP2A3Q93084 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
ATP2A3Q93084 RNU7-171P-201ENST00000459581 62 ntBASIC0.76□□□□□ -2.29
ATP2A3Q93084 MIR18A-201ENST00000362310 71 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ATP2A3Q93084 RNU7-104P-201ENST00000459398 79 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 RNU6-469P-201ENST00000516253 101 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 SNORA18.5-201ENST00000516616 101 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 AC140658.3-201ENST00000567603 271 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
ATP2A3Q93084 RNU6-664P-201ENST00000362381 107 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 Y_RNA.491-201ENST00000384417 107 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 SNORD28-201ENST00000384706 75 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 RNA5SP225-201ENST00000410874 135 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.74□□□□□ -2.29
ATP2A3Q93084 MIR4796-201ENST00000580742 81 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 AC244669.1-204ENST00000621564 178 ntBASIC0.74□□□□□ -2.29
ATP2A3Q93084 Y_RNA.313-201ENST00000365095 103 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 SNORD101-201ENST00000384027 73 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 SNORA25.13-201ENST00000516395 103 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 RNA5SP330-201ENST00000517096 96 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 MIR3920-201ENST00000581751 86 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 MIR3140-201ENST00000583685 90 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 AL109933.3-201ENST00000619095 188 ntBASIC0.73□□□□□ -2.29
ATP2A3Q93084 SNORA36.1-201ENST00000363424 132 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 Y_RNA.207-201ENST00000364142 106 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 RNU6-1124P-201ENST00000384169 107 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 MIR1236-201ENST00000408340 102 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms