Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 SNORD115-44-201ENST00000365391 82 ntBASIC0.53□□□□□ -2.32
VPS41P49754 Y_RNA.596-201ENST00000410462 109 ntBASIC0.53□□□□□ -2.32
VPS41P49754 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
VPS41P49754 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
VPS41P49754 RNU6-1126P-201ENST00000384002 107 ntBASIC0.52□□□□□ -2.33
VPS41P49754 MIR4696-201ENST00000581431 70 ntBASIC0.52□□□□□ -2.33
VPS41P49754 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS41P49754 RNU6-269P-201ENST00000391077 97 ntBASIC0.51□□□□□ -2.33
VPS41P49754 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
VPS41P49754 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
VPS41P49754 Y_RNA.207-201ENST00000364142 106 ntBASIC0.5□□□□□ -2.33
VPS41P49754 MIR548L-201ENST00000408303 86 ntBASIC0.5□□□□□ -2.33
VPS41P49754 AC069271.1-201ENST00000445577 156 ntBASIC0.5□□□□□ -2.33
VPS41P49754 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
VPS41P49754 RNU6-287P-201ENST00000516230 98 ntBASIC0.5□□□□□ -2.33
VPS41P49754 AC026421.1-201ENST00000519101 163 ntBASIC0.5□□□□□ -2.33
VPS41P49754 MIR4536-1-201ENST00000583537 88 ntBASIC0.5□□□□□ -2.33
VPS41P49754 RNU1-29P-201ENST00000606574 126 ntBASIC0.5□□□□□ -2.33
VPS41P49754 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
VPS41P49754 RNU6-664P-201ENST00000362381 107 ntBASIC0.49□□□□□ -2.33
VPS41P49754 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
VPS41P49754 RNU6-132P-201ENST00000383863 107 ntBASIC0.49□□□□□ -2.33
VPS41P49754 SNORD101-201ENST00000384027 73 ntBASIC0.49□□□□□ -2.33
VPS41P49754 RNU6-519P-201ENST00000410590 108 ntBASIC0.49□□□□□ -2.33
VPS41P49754 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
VPS41P49754 MIR2113-201ENST00000459007 91 ntBASIC0.49□□□□□ -2.33
VPS41P49754 RNU6-65P-201ENST00000516332 98 ntBASIC0.49□□□□□ -2.33
VPS41P49754 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS41P49754 MIR617-201ENST00000385030 97 ntBASIC0.48□□□□□ -2.33
VPS41P49754 MIR519E-201ENST00000385075 84 ntBASIC0.48□□□□□ -2.33
VPS41P49754 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.48□□□□□ -2.33
VPS41P49754 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
VPS41P49754 Y_RNA.609-201ENST00000410669 89 ntBASIC0.48□□□□□ -2.33
VPS41P49754 AC093423.1-201ENST00000440817 142 ntBASIC0.47□□□□□ -2.33
VPS41P49754 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
VPS41P49754 MIRLET7F1-201ENST00000362202 87 ntBASIC0.46□□□□□ -2.34
VPS41P49754 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
VPS41P49754 RNY1P7-201ENST00000384743 110 ntBASIC0.46□□□□□ -2.34
VPS41P49754 Y_RNA.694-201ENST00000516677 117 ntBASIC0.46□□□□□ -2.34
VPS41P49754 MIR3064-201ENST00000581130 66 ntBASIC0.46□□□□□ -2.34
VPS41P49754 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.46□□□□□ -2.34
VPS41P49754 MIR6755-201ENST00000619993 66 ntBASIC0.46□□□□□ -2.34
VPS41P49754 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
VPS41P49754 RNU6-49P-201ENST00000384256 107 ntBASIC0.45□□□□□ -2.34
VPS41P49754 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
VPS41P49754 RNU7-74P-201ENST00000459104 62 ntBASIC0.45□□□□□ -2.34
VPS41P49754 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
VPS41P49754 Y_RNA.220-201ENST00000364244 109 ntBASIC0.44□□□□□ -2.34
VPS41P49754 RNU6-1131P-201ENST00000364955 107 ntBASIC0.44□□□□□ -2.34
VPS41P49754 RNU6-935P-201ENST00000410371 100 ntBASIC0.44□□□□□ -2.34
VPS41P49754 snoU13.18-201ENST00000459483 104 ntBASIC0.44□□□□□ -2.34
VPS41P49754 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
VPS41P49754 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
VPS41P49754 RNU6-1298P-201ENST00000362456 101 ntBASIC0.43□□□□□ -2.34
VPS41P49754 Y_RNA.239-201ENST00000364444 113 ntBASIC0.43□□□□□ -2.34
VPS41P49754 RNA5SP484-201ENST00000458857 111 ntBASIC0.43□□□□□ -2.34
VPS41P49754 RNU6-863P-201ENST00000515989 104 ntBASIC0.43□□□□□ -2.34
VPS41P49754 AC104996.3-201ENST00000590718 94 ntBASIC0.43□□□□□ -2.34
VPS41P49754 SNORA70.25-201ENST00000612741 95 ntBASIC0.43□□□□□ -2.34
VPS41P49754 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
VPS41P49754 RNU6-509P-201ENST00000363519 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-811P-201ENST00000384069 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNA5SP292-201ENST00000390974 118 ntBASIC0.42□□□□□ -2.34
VPS41P49754 MTATP6P29-201ENST00000415057 132 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-848P-201ENST00000515948 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-617P-201ENST00000516147 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-473P-201ENST00000516164 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-1049P-201ENST00000516414 107 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU6-844P-201ENST00000517175 102 ntBASIC0.42□□□□□ -2.34
VPS41P49754 MIR4668-201ENST00000582284 70 ntBASIC0.42□□□□□ -2.34
VPS41P49754 RNU1-141P-201ENST00000364623 158 ntBASIC0.41□□□□□ -2.34
VPS41P49754 MIR548U-201ENST00000390728 81 ntBASIC0.41□□□□□ -2.34
VPS41P49754 RNY4P30-201ENST00000410216 95 ntBASIC0.41□□□□□ -2.34
VPS41P49754 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
VPS41P49754 RNU6-219P-201ENST00000364728 107 ntBASIC0.4□□□□□ -2.35
VPS41P49754 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
VPS41P49754 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VPS41P49754 MIR6515-201ENST00000619843 57 ntBASIC0.4□□□□□ -2.35
VPS41P49754 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.4□□□□□ -2.35
VPS41P49754 RNU4-32P-201ENST00000363404 141 ntBASIC0.39□□□□□ -2.35
VPS41P49754 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
VPS41P49754 RNU6-497P-201ENST00000365316 104 ntBASIC0.39□□□□□ -2.35
VPS41P49754 Y_RNA.423-201ENST00000384057 113 ntBASIC0.39□□□□□ -2.35
VPS41P49754 Y_RNA.491-201ENST00000384417 107 ntBASIC0.39□□□□□ -2.35
VPS41P49754 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
VPS41P49754 MIR451A-201ENST00000385059 72 ntBASIC0.39□□□□□ -2.35
VPS41P49754 Y_RNA.620-201ENST00000411009 88 ntBASIC0.39□□□□□ -2.35
VPS41P49754 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
VPS41P49754 SNORA18.5-201ENST00000516616 101 ntBASIC0.39□□□□□ -2.35
VPS41P49754 NAMPTP3-201ENST00000569273 224 ntBASIC0.39□□□□□ -2.35
VPS41P49754 MIR5706-201ENST00000579841 80 ntBASIC0.39□□□□□ -2.35
VPS41P49754 RNU6-633P-201ENST00000362612 103 ntBASIC0.38□□□□□ -2.35
VPS41P49754 SNORD116-22-201ENST00000384430 92 ntBASIC0.38□□□□□ -2.35
VPS41P49754 Y_RNA.508-201ENST00000384502 114 ntBASIC0.38□□□□□ -2.35
VPS41P49754 MIR5582-201ENST00000579697 68 ntBASIC0.38□□□□□ -2.35
VPS41P49754 AC022709.1-201ENST00000615967 87 ntBASIC0.38□□□□□ -2.35
VPS41P49754 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
VPS41P49754 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
VPS41P49754 RNU6-675P-201ENST00000384236 104 ntBASIC0.37□□□□□ -2.35
VPS41P49754 MT-TY-201ENST00000387409 66 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 1243.5 ms