Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LTBRP36941 Y_RNA.115-201ENST00000363272 98 ntBASIC1.09□□□□□ -2.23
LTBRP36941 RNU6-497P-201ENST00000365316 104 ntBASIC1.09□□□□□ -2.23
LTBRP36941 RNU6-811P-201ENST00000384069 107 ntBASIC1.09□□□□□ -2.23
LTBRP36941 RNU6-1265P-201ENST00000516342 103 ntBASIC1.09□□□□□ -2.23
LTBRP36941 RNU6-135P-201ENST00000516769 101 ntBASIC1.09□□□□□ -2.23
LTBRP36941 MIR5588-201ENST00000581890 63 ntBASIC1.09□□□□□ -2.23
LTBRP36941 AL590095.2-201ENST00000604136 117 ntBASIC1.09□□□□□ -2.23
LTBRP36941 U6.100-201ENST00000636230 99 ntBASIC1.09□□□□□ -2.23
LTBRP36941 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
LTBRP36941 RNA5SP173-201ENST00000364857 136 ntBASIC1.08□□□□□ -2.24
LTBRP36941 RNU6-132P-201ENST00000383863 107 ntBASIC1.08□□□□□ -2.24
LTBRP36941 RNU6-242P-201ENST00000384359 107 ntBASIC1.08□□□□□ -2.24
LTBRP36941 MIR548U-201ENST00000390728 81 ntBASIC1.08□□□□□ -2.24
LTBRP36941 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
LTBRP36941 MIR3064-201ENST00000581130 66 ntBASIC1.08□□□□□ -2.24
LTBRP36941 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
LTBRP36941 MIRLET7F1-201ENST00000362202 87 ntBASIC1.07□□□□□ -2.24
LTBRP36941 SNORD115-37-201ENST00000363768 82 ntBASIC1.07□□□□□ -2.24
LTBRP36941 RNU6-1152P-201ENST00000384576 107 ntBASIC1.07□□□□□ -2.24
LTBRP36941 RNA5SP476-201ENST00000516613 103 ntBASIC1.07□□□□□ -2.24
LTBRP36941 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
LTBRP36941 AC104996.3-201ENST00000590718 94 ntBASIC1.07□□□□□ -2.24
LTBRP36941 RNA5SP62-201ENST00000363457 110 ntBASIC1.06□□□□□ -2.24
LTBRP36941 RNA5SP403-201ENST00000363598 108 ntBASIC1.06□□□□□ -2.24
LTBRP36941 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
LTBRP36941 RNU6-979P-201ENST00000383896 107 ntBASIC1.06□□□□□ -2.24
LTBRP36941 SNORD101-201ENST00000384027 73 ntBASIC1.06□□□□□ -2.24
LTBRP36941 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
LTBRP36941 RNU6-592P-201ENST00000411333 103 ntBASIC1.06□□□□□ -2.24
LTBRP36941 RNU7-153P-201ENST00000516455 62 ntBASIC1.06□□□□□ -2.24
LTBRP36941 MIR3678-201ENST00000578455 94 ntBASIC1.06□□□□□ -2.24
LTBRP36941 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
LTBRP36941 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LTBRP36941 RNU6-1229P-201ENST00000364295 107 ntBASIC1.05□□□□□ -2.24
LTBRP36941 Y_RNA.426-201ENST00000384068 113 ntBASIC1.05□□□□□ -2.24
LTBRP36941 RNA5SP292-201ENST00000390974 118 ntBASIC1.05□□□□□ -2.24
LTBRP36941 Y_RNA.596-201ENST00000410462 109 ntBASIC1.05□□□□□ -2.24
LTBRP36941 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.05□□□□□ -2.24
LTBRP36941 RNU7-104P-201ENST00000459398 79 ntBASIC1.05□□□□□ -2.24
LTBRP36941 HAR1A.1-201ENST00000459583 118 ntBASIC1.05□□□□□ -2.24
LTBRP36941 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
LTBRP36941 AC093729.1-201ENST00000513074 128 ntBASIC1.05□□□□□ -2.24
LTBRP36941 RNU7-161P-201ENST00000517289 62 ntBASIC1.05□□□□□ -2.24
LTBRP36941 MIR4639-201ENST00000584938 69 ntBASIC1.05□□□□□ -2.24
LTBRP36941 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
LTBRP36941 AC006160.2-201ENST00000637708 154 ntBASIC1.05□□□□□ -2.24
LTBRP36941 RNU6-664P-201ENST00000362381 107 ntBASIC1.04□□□□□ -2.24
LTBRP36941 SNORD18A-201ENST00000363753 72 ntBASIC1.04□□□□□ -2.24
LTBRP36941 RNU6-1276P-201ENST00000365372 104 ntBASIC1.04□□□□□ -2.24
LTBRP36941 RNU6-573P-201ENST00000383938 106 ntBASIC1.04□□□□□ -2.24
LTBRP36941 SNORD28-201ENST00000384706 75 ntBASIC1.04□□□□□ -2.24
LTBRP36941 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LTBRP36941 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.04□□□□□ -2.24
LTBRP36941 RNU7-13P-201ENST00000516413 62 ntBASIC1.04□□□□□ -2.24
LTBRP36941 MIR4696-201ENST00000581431 70 ntBASIC1.04□□□□□ -2.24
LTBRP36941 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
LTBRP36941 Y_RNA.239-201ENST00000364444 113 ntBASIC1.03□□□□□ -2.24
LTBRP36941 Y_RNA.491-201ENST00000384417 107 ntBASIC1.03□□□□□ -2.24
LTBRP36941 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
LTBRP36941 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
LTBRP36941 SNORA18.5-201ENST00000516616 101 ntBASIC1.03□□□□□ -2.24
LTBRP36941 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
LTBRP36941 AC244669.1-204ENST00000621564 178 ntBASIC1.03□□□□□ -2.24
LTBRP36941 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
LTBRP36941 MIR4796-201ENST00000580742 81 ntBASIC1.02□□□□□ -2.25
LTBRP36941 MTRNR2L2-201ENST00000604882 87 ntBASIC1.02□□□□□ -2.25
LTBRP36941 RNA5SP257-201ENST00000363023 116 ntBASIC1.01□□□□□ -2.25
LTBRP36941 SNORD115-44-201ENST00000365391 82 ntBASIC1.01□□□□□ -2.25
LTBRP36941 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
LTBRP36941 RNU7-171P-201ENST00000459581 62 ntBASIC1.01□□□□□ -2.25
LTBRP36941 MIR4714-201ENST00000580728 77 ntBASIC1.01□□□□□ -2.25
LTBRP36941 AC067863.3-201ENST00000624172 122 ntBASIC1.01□□□□□ -2.25
LTBRP36941 MIR924-201ENST00000638017 53 ntBASIC1.01□□□□□ -2.25
LTBRP36941 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
LTBRP36941 Y_RNA.207-201ENST00000364142 106 ntBASIC0.99□□□□□ -2.25
LTBRP36941 SNORA25.13-201ENST00000516395 103 ntBASIC0.99□□□□□ -2.25
LTBRP36941 RNA5SP47-201ENST00000517230 109 ntBASIC0.99□□□□□ -2.25
LTBRP36941 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
LTBRP36941 AL109933.3-201ENST00000619095 188 ntBASIC0.99□□□□□ -2.25
LTBRP36941 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
LTBRP36941 MIR548L-201ENST00000408303 86 ntBASIC0.98□□□□□ -2.25
LTBRP36941 RNU6-935P-201ENST00000410371 100 ntBASIC0.98□□□□□ -2.25
LTBRP36941 Y_RNA.607-201ENST00000410597 98 ntBASIC0.98□□□□□ -2.25
LTBRP36941 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
LTBRP36941 RNU6-287P-201ENST00000516230 98 ntBASIC0.98□□□□□ -2.25
LTBRP36941 RNA5SP330-201ENST00000517096 96 ntBASIC0.98□□□□□ -2.25
LTBRP36941 AC140658.3-201ENST00000567603 271 ntBASIC0.98□□□□□ -2.25
LTBRP36941 MIR1245B-201ENST00000636115 69 ntBASIC0.98□□□□□ -2.25
LTBRP36941 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
LTBRP36941 SCARNA16.5-201ENST00000517114 183 ntBASIC0.97□□□□□ -2.25
LTBRP36941 RNU6-1057P-201ENST00000517162 102 ntBASIC0.97□□□□□ -2.25
LTBRP36941 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.97□□□□□ -2.25
LTBRP36941 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.97□□□□□ -2.25
LTBRP36941 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LTBRP36941 Y_RNA.219-201ENST00000364232 113 ntBASIC0.96□□□□□ -2.26
LTBRP36941 RNU6-1126P-201ENST00000384002 107 ntBASIC0.96□□□□□ -2.26
LTBRP36941 Y_RNA.437-201ENST00000384113 113 ntBASIC0.96□□□□□ -2.26
LTBRP36941 MIR2113-201ENST00000459007 91 ntBASIC0.96□□□□□ -2.26
LTBRP36941 RNA5SP121-201ENST00000516537 101 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms