Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 RNU6-524P-201ENST00000384270 107 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 RNU6-905P-201ENST00000384434 107 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 MIR181B2-201ENST00000385004 89 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 MIR3678-201ENST00000578455 94 ntBASIC0.38□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 SNORA36.1-201ENST00000363424 132 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 RNA5SP476-201ENST00000516613 103 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 AC069503.3-201ENST00000618674 145 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 HMGN2P22-201ENST00000427588 175 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 RNU6-904P-201ENST00000516206 101 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
SMCHD1A6NHR9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.95-201ENST00000363079 95 ntBASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 uc_338.28-201ENST00000612082 187 ntBASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.173-201ENST00000363776 113 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.239-201ENST00000364444 113 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 RNU7-13P-201ENST00000516413 62 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 Y_RNA.261-201ENST00000364631 102 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 MIR590-201ENST00000385008 97 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 RNU6-86P-201ENST00000606534 107 ntBASIC0.35□□□□□ -2.35
SMCHD1A6NHR9 SNORA7.5-201ENST00000410672 110 ntBASIC0.34□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 RNU6-1014P-201ENST00000383940 103 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 SPINT5P-201ENST00000448174 155 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 RNU7-85P-201ENST00000458851 63 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 RNU7-104P-201ENST00000459398 79 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 RNU6-1131P-201ENST00000364955 107 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 AL161932.1-201ENST00000437408 146 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 AC109327.2-201ENST00000448339 378 ntBASIC0.33□□□□□ -2.36
SMCHD1A6NHR9 RNA5SP89-201ENST00000410300 108 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 SNORD2-201ENST00000459163 69 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 snoU13.11-201ENST00000459219 104 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 RNU7-106P-201ENST00000459514 67 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.32□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-755P-201ENST00000364400 103 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-466P-201ENST00000391224 103 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 SNORD4B-201ENST00000459083 72 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-65P-201ENST00000516332 98 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-153P-201ENST00000364422 104 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-215P-201ENST00000365169 102 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-291P-201ENST00000384720 107 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 MIR516B1-201ENST00000385211 90 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 SNORD110-201ENST00000408189 75 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU7-74P-201ENST00000459104 62 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.31□□□□□ -2.36
SMCHD1A6NHR9 RNY4P3-201ENST00000365254 95 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 RNU6-147P-201ENST00000383983 107 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 MT-TY-201ENST00000387409 66 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 RNA5SP299-201ENST00000391203 116 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 SNORD101-201ENST00000384027 73 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 MIR548U-201ENST00000390728 81 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 RNU6-795P-201ENST00000516323 103 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 MIR4667-201ENST00000578933 66 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 AC104408.1-201ENST00000605241 170 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 MIR6759-201ENST00000638110 65 ntBASIC0.3□□□□□ -2.36
SMCHD1A6NHR9 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
SMCHD1A6NHR9 RNU6-158P-201ENST00000517104 100 ntBASIC0.29□□□□□ -2.36
SMCHD1A6NHR9 MIR7107-201ENST00000611489 80 ntBASIC0.29□□□□□ -2.36
SMCHD1A6NHR9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 RNU6-624P-201ENST00000363411 107 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 RNU6-1113P-201ENST00000384348 107 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 MIR519E-201ENST00000385075 84 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 MIR501-201ENST00000390204 84 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 MIR3920-201ENST00000581751 86 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
SMCHD1A6NHR9 SNORD115-24-201ENST00000363528 82 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 RNU6-269P-201ENST00000391077 97 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.607-201ENST00000410597 98 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 uc_338.10-201ENST00000621872 182 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 AC006160.2-201ENST00000637708 154 ntBASIC0.28□□□□□ -2.37
SMCHD1A6NHR9 RNU6V-201ENST00000384105 107 ntBASIC0.27□□□□□ -2.37
SMCHD1A6NHR9 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
SMCHD1A6NHR9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
SMCHD1A6NHR9 U7.3-201ENST00000616123 62 ntBASIC0.27□□□□□ -2.37
SMCHD1A6NHR9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 410.7 ms