Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 RNU1-119P-201ENST00000391122 165 ntBASIC1.55□□□□□ -2.16
SNCAIPQ9Y6H5 RNA5SP225-201ENST00000410874 135 ntBASIC1.55□□□□□ -2.16
SNCAIPQ9Y6H5 RNU6-448P-201ENST00000517052 107 ntBASIC1.55□□□□□ -2.16
SNCAIPQ9Y6H5 AL078603.1-201ENST00000603824 313 ntBASIC1.55□□□□□ -2.16
SNCAIPQ9Y6H5 RNU6-369P-201ENST00000362515 102 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 RNU6-957P-201ENST00000363652 99 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 SNORA25-201ENST00000384384 134 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 RNU6-535P-201ENST00000384722 107 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 MIR520F-201ENST00000384824 87 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 RNU7-56P-201ENST00000458744 62 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
SNCAIPQ9Y6H5 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
SNCAIPQ9Y6H5 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
SNCAIPQ9Y6H5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.53□□□□□ -2.16
SNCAIPQ9Y6H5 AC008608.1-201ENST00000603910 127 ntBASIC1.53□□□□□ -2.16
SNCAIPQ9Y6H5 RNU6-811P-201ENST00000384069 107 ntBASIC1.52□□□□□ -2.17
SNCAIPQ9Y6H5 RNU6-638P-201ENST00000516582 104 ntBASIC1.52□□□□□ -2.17
SNCAIPQ9Y6H5 AC138907.6-201ENST00000568401 126 ntBASIC1.52□□□□□ -2.17
SNCAIPQ9Y6H5 AC138869.1-201ENST00000568623 124 ntBASIC1.52□□□□□ -2.17
SNCAIPQ9Y6H5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 SNORD114-27-201ENST00000363766 70 ntBASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 RNU6-291P-201ENST00000384720 107 ntBASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 MIR6734-201ENST00000621166 68 ntBASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 MIR6767-201ENST00000637302 66 ntBASIC1.51□□□□□ -2.17
SNCAIPQ9Y6H5 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 MIR520E-201ENST00000384867 87 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 MIR7-2-201ENST00000384970 110 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 MIR519A1-201ENST00000385257 85 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 RNU6-75P-201ENST00000515944 104 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 SNORA25.13-201ENST00000516395 103 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 AC022709.1-201ENST00000615967 87 ntBASIC1.5□□□□□ -2.17
SNCAIPQ9Y6H5 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 MIR599-201ENST00000385069 95 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 MIR1827-201ENST00000408549 66 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.49□□□□□ -2.17
SNCAIPQ9Y6H5 MIRLET7F1-201ENST00000362202 87 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 RNU6-132P-201ENST00000383863 107 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 RNA5SP292-201ENST00000390974 118 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 AC097635.1-201ENST00000450678 155 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 AC140658.3-201ENST00000567603 271 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 MIR4796-201ENST00000580742 81 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 TRDV1-202ENST00000621643 102 ntBASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
SNCAIPQ9Y6H5 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 MIR548U-201ENST00000390728 81 ntBASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 SNORD89-201ENST00000390981 114 ntBASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 AL606490.4-201ENST00000423117 127 ntBASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 SNORA18.5-201ENST00000516616 101 ntBASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNCAIPQ9Y6H5 RPS29P1-201ENST00000465274 159 ntBASIC1.46□□□□□ -2.18
SNCAIPQ9Y6H5 MIR3064-201ENST00000581130 66 ntBASIC1.46□□□□□ -2.18
SNCAIPQ9Y6H5 AC104996.3-201ENST00000590718 94 ntBASIC1.46□□□□□ -2.18
SNCAIPQ9Y6H5 Y_RNA.221-201ENST00000364248 96 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 RNU6-939P-201ENST00000384634 107 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 MIR520H-201ENST00000385126 88 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 RNA5SP480-201ENST00000516840 109 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
SNCAIPQ9Y6H5 Y_RNA.491-201ENST00000384417 107 ntBASIC1.44□□□□□ -2.18
SNCAIPQ9Y6H5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SNCAIPQ9Y6H5 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SNCAIPQ9Y6H5 RNA5SP395-201ENST00000516567 118 ntBASIC1.44□□□□□ -2.18
SNCAIPQ9Y6H5 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
SNCAIPQ9Y6H5 RNU6-279P-201ENST00000391297 101 ntBASIC1.43□□□□□ -2.18
SNCAIPQ9Y6H5 RNU6-857P-201ENST00000515893 110 ntBASIC1.43□□□□□ -2.18
SNCAIPQ9Y6H5 SNORA31.14-201ENST00000516728 116 ntBASIC1.43□□□□□ -2.18
SNCAIPQ9Y6H5 AL136317.1-201ENST00000612653 226 ntBASIC1.43□□□□□ -2.18
SNCAIPQ9Y6H5 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
SNCAIPQ9Y6H5 FABP5P4-201ENST00000437203 171 ntBASIC1.42□□□□□ -2.18
SNCAIPQ9Y6H5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 MIR942-201ENST00000401111 86 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 SNORD124-201ENST00000459577 104 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 uc_338.16-201ENST00000621804 95 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 U6.100-201ENST00000636230 99 ntBASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SNCAIPQ9Y6H5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 Y_RNA.244-201ENST00000364484 109 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 RNA5SP117-201ENST00000365294 118 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 SNORD101-201ENST00000384027 73 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 RNU6-129P-201ENST00000391022 107 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 AL450471.1-201ENST00000447509 127 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 MIR6788-201ENST00000618842 66 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 MIR6515-201ENST00000619843 57 ntBASIC1.4□□□□□ -2.19
SNCAIPQ9Y6H5 RNU6-664P-201ENST00000362381 107 ntBASIC1.39□□□□□ -2.19
SNCAIPQ9Y6H5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.39□□□□□ -2.19
SNCAIPQ9Y6H5 RNU6-24P-201ENST00000384440 107 ntBASIC1.39□□□□□ -2.19
SNCAIPQ9Y6H5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.39□□□□□ -2.19
SNCAIPQ9Y6H5 AC244505.6-201ENST00000452829 130 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms