Protein–RNA interactions for Protein: Q9Y466

NR2E1, Nuclear receptor subfamily 2 group E member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E1Q9Y466 MIR548H5-201ENST00000580314 60 ntBASIC1.31□□□□□ -2.2
NR2E1Q9Y466 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
NR2E1Q9Y466 AC008608.1-201ENST00000603910 127 ntBASIC1.31□□□□□ -2.2
NR2E1Q9Y466 RNU4-32P-201ENST00000363404 141 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 Y_RNA.283-201ENST00000364798 112 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 MIR519A1-201ENST00000385257 85 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 MIR548J-201ENST00000408833 112 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 RNU6-994P-201ENST00000410507 111 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 Y_RNA.607-201ENST00000410597 98 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 RNU6-638P-201ENST00000516582 104 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 RNU6-448P-201ENST00000517052 107 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.3□□□□□ -2.2
NR2E1Q9Y466 AC027335.2-201ENST00000624030 375 ntBASIC1.3□□□□□ -2.2
NR2E1Q9Y466 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NR2E1Q9Y466 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 RNU6-957P-201ENST00000363652 99 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 RNA5SP325-201ENST00000363756 130 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 RNU6-364P-201ENST00000384387 107 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 AC002429.1-201ENST00000437672 148 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 RNU7-102P-201ENST00000458948 62 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 AC093729.1-201ENST00000513074 128 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 Y_RNA.697-201ENST00000516776 113 ntBASIC1.29□□□□□ -2.2
NR2E1Q9Y466 RNA5SP245-201ENST00000364239 121 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 RNU6-291P-201ENST00000384720 107 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 AL606490.4-201ENST00000423117 127 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 AC140658.3-201ENST00000567603 271 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 MIR4536-1-201ENST00000583537 88 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 RNU7-10P-201ENST00000607194 63 ntBASIC1.28□□□□□ -2.2
NR2E1Q9Y466 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
NR2E1Q9Y466 Y_RNA.316-201ENST00000365118 111 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 RNU6-652P-201ENST00000365488 107 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 RNU6-132P-201ENST00000383863 107 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 MIR100-201ENST00000385259 80 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 MIR1236-201ENST00000408340 102 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 Y_RNA.809-201ENST00000516058 95 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
NR2E1Q9Y466 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NR2E1Q9Y466 RNU6-1260P-201ENST00000362944 107 ntBASIC1.26□□□□□ -2.21
NR2E1Q9Y466 RNA5SP292-201ENST00000390974 118 ntBASIC1.26□□□□□ -2.21
NR2E1Q9Y466 RNU6-466P-201ENST00000391224 103 ntBASIC1.26□□□□□ -2.21
NR2E1Q9Y466 MIR1827-201ENST00000408549 66 ntBASIC1.26□□□□□ -2.21
NR2E1Q9Y466 RNU6-65P-201ENST00000516332 98 ntBASIC1.26□□□□□ -2.21
NR2E1Q9Y466 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.26□□□□□ -2.21
NR2E1Q9Y466 MIR1-1-201ENST00000362147 71 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 SNORD115-37-201ENST00000363768 82 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 RNU6-811P-201ENST00000384069 107 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 RNU6-535P-201ENST00000384722 107 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 RNU6-279P-201ENST00000391297 101 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.25□□□□□ -2.21
NR2E1Q9Y466 SNORA25.13-201ENST00000516395 103 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 MIR3064-201ENST00000581130 66 ntBASIC1.25□□□□□ -2.21
NR2E1Q9Y466 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.25□□□□□ -2.21
NR2E1Q9Y466 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
NR2E1Q9Y466 MIR520F-201ENST00000384824 87 ntBASIC1.24□□□□□ -2.21
NR2E1Q9Y466 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NR2E1Q9Y466 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.24□□□□□ -2.21
NR2E1Q9Y466 AC097635.1-201ENST00000450678 155 ntBASIC1.24□□□□□ -2.21
NR2E1Q9Y466 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.24□□□□□ -2.21
NR2E1Q9Y466 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NR2E1Q9Y466 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
NR2E1Q9Y466 MIRLET7F1-201ENST00000362202 87 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 RNU1-119P-201ENST00000391122 165 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 AC138907.6-201ENST00000568401 126 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 AC138869.1-201ENST00000568623 124 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 AC104996.3-201ENST00000590718 94 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 TRDV1-202ENST00000621643 102 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
NR2E1Q9Y466 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
NR2E1Q9Y466 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 Y_RNA.94-201ENST00000363068 106 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 MIR599-201ENST00000385069 95 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 RNU6-857P-201ENST00000515893 110 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 SNORA18.5-201ENST00000516616 101 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 MIR4796-201ENST00000580742 81 ntBASIC1.22□□□□□ -2.21
NR2E1Q9Y466 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NR2E1Q9Y466 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
NR2E1Q9Y466 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
NR2E1Q9Y466 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.21□□□□□ -2.22
NR2E1Q9Y466 U6.100-201ENST00000636230 99 ntBASIC1.21□□□□□ -2.22
NR2E1Q9Y466 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
NR2E1Q9Y466 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NR2E1Q9Y466 Y_RNA.32-201ENST00000362589 110 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 RNU6-624P-201ENST00000363411 107 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 AC244505.6-201ENST00000452829 130 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 MIR4712-201ENST00000583750 82 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 uc_338.16-201ENST00000621804 95 ntBASIC1.2□□□□□ -2.22
NR2E1Q9Y466 RNU6-478P-201ENST00000363904 110 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 Y_RNA.205-201ENST00000364128 113 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 Y_RNA.491-201ENST00000384417 107 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 SNORD90-201ENST00000391145 111 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.19□□□□□ -2.22
NR2E1Q9Y466 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms