Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 SNORD100-201ENST00000408573 76 ntBASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 SNORD115-27-201ENST00000364430 82 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 MIR516A2-201ENST00000384888 90 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 MIR516A1-201ENST00000385033 90 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-243P-201ENST00000391140 107 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 SNORD63B-201ENST00000411005 70 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 RNU7-85P-201ENST00000458851 63 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 SNORD92-201ENST00000585078 85 ntBASIC1.37□□□□□ -2.19
PTPN22Q9Y2R2 MIR101-2-201ENST00000362195 79 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 MIR635-201ENST00000384830 98 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 MIR1236-201ENST00000408340 102 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 AC093729.1-201ENST00000513074 128 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 MIR4771-2-201ENST00000577758 74 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 MIR4771-1-201ENST00000582617 74 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 AC013244.2-201ENST00000603396 103 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 AC027335.2-201ENST00000624030 375 ntBASIC1.36□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.35□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-279P-201ENST00000391297 101 ntBASIC1.35□□□□□ -2.19
PTPN22Q9Y2R2 RNU7-106P-201ENST00000459514 67 ntBASIC1.35□□□□□ -2.19
PTPN22Q9Y2R2 MIR4676-201ENST00000583078 72 ntBASIC1.35□□□□□ -2.19
PTPN22Q9Y2R2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PTPN22Q9Y2R2 MIR373-201ENST00000362273 69 ntBASIC1.34□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-369P-201ENST00000362515 102 ntBASIC1.34□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-524P-201ENST00000384270 107 ntBASIC1.34□□□□□ -2.19
PTPN22Q9Y2R2 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PTPN22Q9Y2R2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PTPN22Q9Y2R2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 SNORD115-37-201ENST00000363768 82 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 MIR938-201ENST00000401216 83 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 MIR1255A-201ENST00000408338 113 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 snoU13.11-201ENST00000459219 104 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 TRAJ51-201ENST00000504127 63 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 RNU7-156P-201ENST00000517214 74 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 AC140658.3-201ENST00000567603 271 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 AC023827.1-201ENST00000569247 97 ntBASIC1.33□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.437-201ENST00000384113 113 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-466P-201ENST00000391224 103 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 AC092628.1-201ENST00000436250 252 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 AC002429.1-201ENST00000437672 148 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-75P-201ENST00000515944 104 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.32□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 AC097635.1-201ENST00000450678 155 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-65P-201ENST00000516332 98 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-448P-201ENST00000517052 107 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 MIR4536-1-201ENST00000583537 88 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 AC211469.2-201ENST00000605461 205 ntBASIC1.31□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.313-201ENST00000365095 103 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 MIR200A-201ENST00000384875 90 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-994P-201ENST00000410507 111 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 AC138907.6-201ENST00000568401 126 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 AC138869.1-201ENST00000568623 124 ntBASIC1.3□□□□□ -2.2
PTPN22Q9Y2R2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-811P-201ENST00000384069 107 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-364P-201ENST00000384387 107 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 MIR1827-201ENST00000408549 66 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 AC015818.7-201ENST00000428754 109 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 RNU7-56P-201ENST00000458744 62 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 RNU7-195P-201ENST00000458793 62 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.29□□□□□ -2.2
PTPN22Q9Y2R2 RNU6-624P-201ENST00000363411 107 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 RNA5SP457-201ENST00000363657 124 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 RNA5SP225-201ENST00000410874 135 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 FABP5P4-201ENST00000437203 171 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 SNORA25.13-201ENST00000516395 103 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
PTPN22Q9Y2R2 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 RNU4-32P-201ENST00000363404 141 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-24P-201ENST00000384440 107 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-291P-201ENST00000384720 107 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 MIR548U-201ENST00000390728 81 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 MIR942-201ENST00000401111 86 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.27□□□□□ -2.21
PTPN22Q9Y2R2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-957P-201ENST00000363652 99 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-652P-201ENST00000365488 107 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 MIR193B-201ENST00000384907 83 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 AC244505.6-201ENST00000452829 130 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-857P-201ENST00000515893 110 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-977P-201ENST00000516411 103 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms