Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNY1P7-201ENST00000384743 110 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 AC107027.2-201ENST00000512197 115 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-90P-201ENST00000606352 106 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 AC087741.2-201ENST00000619415 172 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 SNORD115-19-201ENST00000363098 82 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 SNORD115-18-201ENST00000363293 82 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 SNORD115-17-201ENST00000364612 82 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-616P-201ENST00000384353 107 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU4-71P-201ENST00000516258 113 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNU6-521P-201ENST00000516663 105 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 RNY4P20-201ENST00000516678 93 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 AP001328.1-201ENST00000528550 176 ntBASIC-0.69□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.7□□□□□ -2.52
SHANK3Q9BYB0 RNU6-867P-201ENST00000364956 107 ntBASIC-0.7□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.7□□□□□ -2.52
SHANK3Q9BYB0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
SHANK3Q9BYB0 MIR3121-201ENST00000579680 77 ntBASIC-0.7□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 RNY4P6-201ENST00000363667 96 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 SNORA3B-201ENST00000391305 131 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 AP000676.1-201ENST00000533307 52 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 MIR3681-201ENST00000580089 72 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 MIR4441-201ENST00000582623 100 ntBASIC-0.71□□□□□ -2.52
SHANK3Q9BYB0 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.72□□□□□ -2.52
SHANK3Q9BYB0 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.72□□□□□ -2.52
SHANK3Q9BYB0 MTCYBP6-201ENST00000441810 138 ntBASIC-0.72□□□□□ -2.52
SHANK3Q9BYB0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.72□□□□□ -2.52
SHANK3Q9BYB0 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.72□□□□□ -2.53
SHANK3Q9BYB0 SNORA51.5-201ENST00000384126 131 ntBASIC-0.72□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.72□□□□□ -2.53
SHANK3Q9BYB0 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.72□□□□□ -2.53
SHANK3Q9BYB0 AL512310.12-203ENST00000640543 90 ntBASIC-0.72□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 RNU6-480P-201ENST00000384332 107 ntBASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 RNU6-239P-201ENST00000390990 99 ntBASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 RNU6-918P-201ENST00000391219 106 ntBASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.73□□□□□ -2.53
SHANK3Q9BYB0 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 MIR3163-201ENST00000581592 73 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 MIR4436A-201ENST00000585278 85 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 U6.100-201ENST00000636230 99 ntBASIC-0.74□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 MIR652-201ENST00000385278 98 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 MIR548AE1-201ENST00000583292 70 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 SNORD74.6-201ENST00000364796 70 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 MIR518B-201ENST00000385127 83 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 RNU7-6P-201ENST00000516845 62 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 TRDV1-202ENST00000621643 102 ntBASIC-0.75□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNU6-508P-201ENST00000363231 103 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 U3.27-201ENST00000391237 200 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNU2-38P-201ENST00000410856 79 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNA5SP136-201ENST00000410906 107 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RN7SKP19-201ENST00000516016 252 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 MIR548O2-201ENST00000616090 70 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 MIR6738-201ENST00000619620 64 ntBASIC-0.76□□□□□ -2.53
SHANK3Q9BYB0 RNU6-797P-201ENST00000363101 109 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 MIR34C-201ENST00000384831 77 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 RNU7-121P-201ENST00000516604 62 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 AC130289.1-201ENST00000577321 73 ntBASIC-0.77□□□□□ -2.53
SHANK3Q9BYB0 SNORD38.1-201ENST00000363863 68 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 SNORD56B-201ENST00000384713 71 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 RNU6-235P-201ENST00000362644 107 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 RNU6-363P-201ENST00000362895 105 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 RNU6-957P-201ENST00000363652 99 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 SNORD101-201ENST00000384027 73 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 SPINT5P-201ENST00000448174 155 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms