Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 SNORD116-18-201ENST00000383961 92 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 MIR519E-201ENST00000385075 84 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 SPINT5P-201ENST00000448174 155 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 AP001328.1-201ENST00000528550 176 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 MIR548AG2-201ENST00000581228 64 ntBASIC-0.51□□□□□ -2.49
CHMP4AQ9BY43 MIR148A-201ENST00000362215 68 ntBASIC-0.52□□□□□ -2.49
CHMP4AQ9BY43 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.52□□□□□ -2.49
CHMP4AQ9BY43 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.52□□□□□ -2.49
CHMP4AQ9BY43 MIR617-201ENST00000385030 97 ntBASIC-0.52□□□□□ -2.49
CHMP4AQ9BY43 Z95118.1-201ENST00000421372 247 ntBASIC-0.52□□□□□ -2.49
CHMP4AQ9BY43 RNU6-647P-201ENST00000364243 107 ntBASIC-0.53□□□□□ -2.49
CHMP4AQ9BY43 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.53□□□□□ -2.49
CHMP4AQ9BY43 SNORA81.3-201ENST00000517283 198 ntBASIC-0.53□□□□□ -2.49
CHMP4AQ9BY43 YWHAEP2-201ENST00000580066 112 ntBASIC-0.53□□□□□ -2.49
CHMP4AQ9BY43 MIR4493-201ENST00000584016 73 ntBASIC-0.53□□□□□ -2.49
CHMP4AQ9BY43 RNU6-243P-201ENST00000391140 107 ntBASIC-0.54□□□□□ -2.5
CHMP4AQ9BY43 RNA5SP136-201ENST00000410906 107 ntBASIC-0.54□□□□□ -2.5
CHMP4AQ9BY43 MIR4460-201ENST00000577862 86 ntBASIC-0.54□□□□□ -2.5
CHMP4AQ9BY43 AC069503.3-201ENST00000618674 145 ntBASIC-0.54□□□□□ -2.5
CHMP4AQ9BY43 uc_338.10-201ENST00000621872 182 ntBASIC-0.54□□□□□ -2.5
CHMP4AQ9BY43 MIR2113-201ENST00000459007 91 ntBASIC-0.55□□□□□ -2.5
CHMP4AQ9BY43 AC004792.1-201ENST00000614523 137 ntBASIC-0.55□□□□□ -2.5
CHMP4AQ9BY43 MIR6086-201ENST00000638065 55 ntBASIC-0.55□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 SNORA51.5-201ENST00000384126 131 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 RNU6-735P-201ENST00000410612 107 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 RNU6-758P-201ENST00000516292 89 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 RNU7-188P-201ENST00000517063 64 ntBASIC-0.56□□□□□ -2.5
CHMP4AQ9BY43 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 AL161932.1-201ENST00000437408 146 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 RNU6-287P-201ENST00000516230 98 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 RN7SL660P-201ENST00000614852 299 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 TRDV1-202ENST00000621643 102 ntBASIC-0.57□□□□□ -2.5
CHMP4AQ9BY43 MIR101-1-201ENST00000362265 75 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 MIR604-201ENST00000384880 94 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 MIR548D2-201ENST00000384955 97 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 MIR181B2-201ENST00000385004 89 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
CHMP4AQ9BY43 U8.6-201ENST00000364939 135 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 AC093423.1-201ENST00000440817 142 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 MIR548X2-201ENST00000579776 100 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 AL353621.2-201ENST00000605340 133 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 RNU6-90P-201ENST00000606352 106 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 AP001340.1-201ENST00000624405 217 ntBASIC-0.59□□□□□ -2.5
CHMP4AQ9BY43 MIR548G-201ENST00000408442 89 ntBASIC-0.6□□□□□ -2.51
CHMP4AQ9BY43 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
CHMP4AQ9BY43 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.6□□□□□ -2.51
CHMP4AQ9BY43 MIR3666-201ENST00000607845 111 ntBASIC-0.6□□□□□ -2.51
CHMP4AQ9BY43 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.61□□□□□ -2.51
CHMP4AQ9BY43 SNORD36A-201ENST00000362874 73 ntBASIC-0.61□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.61□□□□□ -2.51
CHMP4AQ9BY43 RNU6-320P-201ENST00000516511 106 ntBASIC-0.61□□□□□ -2.51
CHMP4AQ9BY43 AL162726.3-218ENST00000636401 95 ntBASIC-0.61□□□□□ -2.51
CHMP4AQ9BY43 RNU6-363P-201ENST00000362895 105 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 SNORD38.1-201ENST00000363863 68 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNU6-804P-201ENST00000384286 107 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 MT-TG-201ENST00000387429 68 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNA5SP300-201ENST00000391197 107 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNU6-394P-201ENST00000410735 107 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNU6-781P-201ENST00000516377 101 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 U6.100-201ENST00000636230 99 ntBASIC-0.62□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.63□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.63□□□□□ -2.51
CHMP4AQ9BY43 AL158147.1-201ENST00000443970 75 ntBASIC-0.63□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 RNA5SP275-201ENST00000363936 118 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 SNORD114-29-201ENST00000364819 70 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 RNU6-409P-201ENST00000384114 104 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 MIR548AE1-201ENST00000583292 70 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 U7.2-201ENST00000607576 63 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.64□□□□□ -2.51
CHMP4AQ9BY43 RNU6-957P-201ENST00000363652 99 ntBASIC-0.65□□□□□ -2.51
CHMP4AQ9BY43 RNA5SP368-201ENST00000364298 116 ntBASIC-0.65□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.65□□□□□ -2.51
CHMP4AQ9BY43 AC244250.2-201ENST00000418731 148 ntBASIC-0.65□□□□□ -2.51
CHMP4AQ9BY43 MIR4263-201ENST00000584745 83 ntBASIC-0.65□□□□□ -2.51
CHMP4AQ9BY43 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 RNU6-154P-201ENST00000384306 106 ntBASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 MIR3144-201ENST00000579460 79 ntBASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 MIR6507-201ENST00000613630 70 ntBASIC-0.66□□□□□ -2.52
CHMP4AQ9BY43 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.67□□□□□ -2.52
CHMP4AQ9BY43 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.67□□□□□ -2.52
CHMP4AQ9BY43 SNORD14C-201ENST00000365382 88 ntBASIC-0.67□□□□□ -2.52
CHMP4AQ9BY43 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms