Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR548U-201ENST00000390728 81 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 RNA5SP292-201ENST00000390974 118 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 SNORA25.13-201ENST00000516395 103 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 AC104996.3-201ENST00000590718 94 ntBASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PTCHD1Q96NR3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 AC244505.6-201ENST00000452829 130 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 RNU6-638P-201ENST00000516582 104 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 MIR4796-201ENST00000580742 81 ntBASIC1.3□□□□□ -2.2
PTCHD1Q96NR3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 U7.7-201ENST00000459276 60 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 SNORA18.5-201ENST00000516616 101 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 SNORA31.14-201ENST00000516728 116 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
PTCHD1Q96NR3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 MIR200A-201ENST00000384875 90 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 MIR518E-201ENST00000385252 88 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 MIR942-201ENST00000401111 86 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 RNA5SP395-201ENST00000516567 118 ntBASIC1.28□□□□□ -2.2
PTCHD1Q96NR3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 SNORD105-201ENST00000386910 85 ntBASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 U6.100-201ENST00000636230 99 ntBASIC1.27□□□□□ -2.21
PTCHD1Q96NR3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTCHD1Q96NR3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.26□□□□□ -2.21
PTCHD1Q96NR3 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
PTCHD1Q96NR3 RNU6-279P-201ENST00000391297 101 ntBASIC1.26□□□□□ -2.21
PTCHD1Q96NR3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
PTCHD1Q96NR3 RNU6-664P-201ENST00000362381 107 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 SNORD101-201ENST00000384027 73 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
PTCHD1Q96NR3 RNU6-624P-201ENST00000363411 107 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 RNA5SP117-201ENST00000365294 118 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 RNA5SP247-201ENST00000411181 105 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 MIR4696-201ENST00000581431 70 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
PTCHD1Q96NR3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
PTCHD1Q96NR3 RNU6-129P-201ENST00000391022 107 ntBASIC1.23□□□□□ -2.21
PTCHD1Q96NR3 RNU6-857P-201ENST00000515893 110 ntBASIC1.23□□□□□ -2.21
PTCHD1Q96NR3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
PTCHD1Q96NR3 SNORD115-24-201ENST00000363528 82 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 AL450471.1-201ENST00000447509 127 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
PTCHD1Q96NR3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.21□□□□□ -2.22
PTCHD1Q96NR3 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
PTCHD1Q96NR3 MIR4712-201ENST00000583750 82 ntBASIC1.21□□□□□ -2.22
PTCHD1Q96NR3 SNORA63.2-201ENST00000362603 126 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 RNU6-24P-201ENST00000384440 107 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 AC025627.3-201ENST00000582078 182 ntBASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
PTCHD1Q96NR3 RNU6-478P-201ENST00000363904 110 ntBASIC1.19□□□□□ -2.22
PTCHD1Q96NR3 SNORA25.9-201ENST00000365087 128 ntBASIC1.19□□□□□ -2.22
PTCHD1Q96NR3 MIR644A-201ENST00000385262 94 ntBASIC1.19□□□□□ -2.22
PTCHD1Q96NR3 FGF7P7-201ENST00000514120 227 ntBASIC1.19□□□□□ -2.22
PTCHD1Q96NR3 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
PTCHD1Q96NR3 RNU6-315P-201ENST00000362666 107 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNA5SP403-201ENST00000363598 108 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 MIR573-201ENST00000384964 99 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 SNORD90-201ENST00000391145 111 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNU6-469P-201ENST00000516253 101 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNU7-13P-201ENST00000516413 62 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNU6-135P-201ENST00000516769 101 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNU6-557P-201ENST00000516842 110 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 RNU7-161P-201ENST00000517289 62 ntBASIC1.18□□□□□ -2.22
PTCHD1Q96NR3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.17□□□□□ -2.22
PTCHD1Q96NR3 SNORD115-44-201ENST00000365391 82 ntBASIC1.17□□□□□ -2.22
PTCHD1Q96NR3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms