Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 MIR548G-201ENST00000408442 89 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 AC244250.2-201ENST00000418731 148 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 MIR2113-201ENST00000459007 91 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 RNU6-90P-201ENST00000606352 106 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.26□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 RNU6-409P-201ENST00000384114 104 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 RNU6-243P-201ENST00000391140 107 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 SNORA7.5-201ENST00000410672 110 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 TRDV1-202ENST00000621643 102 ntBASIC-0.27□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 SNORD58C-201ENST00000365223 64 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 MIR489-201ENST00000384923 84 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 MIR516B1-201ENST00000385211 90 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 RNU6-287P-201ENST00000516230 98 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 MTND5P41-201ENST00000517498 206 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 AC025166.1-201ENST00000612411 163 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 AL512310.12-203ENST00000640543 90 ntBASIC-0.28□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 MIR1912-201ENST00000410389 80 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 RNA5SP330-201ENST00000517096 96 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 AC007012.1-201ENST00000567192 175 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 MIR3666-201ENST00000607845 111 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 AL442128.1-201ENST00000615151 90 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 AL162726.3-218ENST00000636401 95 ntBASIC-0.29□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 MIR181B2-201ENST00000385004 89 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 MT-TY-201ENST00000387409 66 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 SPINT5P-201ENST00000448174 155 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 MIR4679-2-201ENST00000578358 77 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 MIR548AE1-201ENST00000583292 70 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 AL590491.3-201ENST00000610731 82 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 uc_338.10-201ENST00000621872 182 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 U6.100-201ENST00000636230 99 ntBASIC-0.3□□□□□ -2.46
RPUSD4Q96CM3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 RNU6-235P-201ENST00000362644 107 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 U8.6-201ENST00000364939 135 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 MIR216B-201ENST00000390186 82 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 RNU7-200P-201ENST00000516105 62 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 RNU6-426P-201ENST00000516464 97 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 RNU6-794P-201ENST00000517261 64 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 MIR4460-201ENST00000577862 86 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 YWHAEP2-201ENST00000580066 112 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.31□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 RNY1P5-201ENST00000383890 115 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 MTND4LP9-201ENST00000427694 174 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 SNORD114-29-201ENST00000364819 70 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNU6-816P-201ENST00000390914 107 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
RPUSD4Q96CM3 RNU6-957P-201ENST00000363652 99 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 SNORA40-201ENST00000388090 126 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 MIR4473-201ENST00000583731 91 ntBASIC-0.34□□□□□ -2.46
RPUSD4Q96CM3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 RNU6-466P-201ENST00000391224 103 ntBASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 MIR4694-201ENST00000578534 80 ntBASIC-0.35□□□□□ -2.47
RPUSD4Q96CM3 MIR4436A-201ENST00000585278 85 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms