Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MIR4679-1-201ENST00000637619 75 ntBASIC1.07□□□□□ -2.24
ERCC4Q92889 RNU6-497P-201ENST00000365316 104 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 RNU6-675P-201ENST00000384236 104 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 AL161932.1-201ENST00000437408 146 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 SNORD4B-201ENST00000459083 72 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 snoU13.11-201ENST00000459219 104 ntBASIC1.06□□□□□ -2.24
ERCC4Q92889 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 RNU6-219P-201ENST00000364728 107 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 SNORD116-22-201ENST00000384430 92 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 Y_RNA.593-201ENST00000410292 98 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 Y_RNA.609-201ENST00000410669 89 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 RNU6-1265P-201ENST00000516342 103 ntBASIC1.05□□□□□ -2.24
ERCC4Q92889 Y_RNA.17-201ENST00000362433 111 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 Y_RNA.283-201ENST00000364798 112 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 SNORD99-201ENST00000408612 74 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 Y_RNA.620-201ENST00000411009 88 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 MIR4668-201ENST00000582284 70 ntBASIC1.04□□□□□ -2.24
ERCC4Q92889 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
ERCC4Q92889 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.04□□□□□ -2.24
ERCC4Q92889 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 RNA5SP117-201ENST00000365294 118 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 RNU6-135P-201ENST00000516769 101 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
ERCC4Q92889 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.03□□□□□ -2.24
ERCC4Q92889 RNU6-957P-201ENST00000363652 99 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 RNU6-1134P-201ENST00000365156 101 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 RNU6-519P-201ENST00000410590 108 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 AL606490.4-201ENST00000423117 127 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
ERCC4Q92889 RNA5SP403-201ENST00000363598 108 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 RNU6-524P-201ENST00000384270 107 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 RNU6-466P-201ENST00000391224 103 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 MTRNR2L2-201ENST00000604882 87 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 TRDV1-202ENST00000621643 102 ntBASIC1.01□□□□□ -2.25
ERCC4Q92889 RNU6-633P-201ENST00000362612 103 ntBASIC1□□□□□ -2.25
ERCC4Q92889 SNORD73B-201ENST00000364394 72 ntBASIC1□□□□□ -2.25
ERCC4Q92889 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
ERCC4Q92889 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1□□□□□ -2.25
ERCC4Q92889 RNU6-402P-201ENST00000410678 103 ntBASIC1□□□□□ -2.25
ERCC4Q92889 RNU6-762P-201ENST00000517107 102 ntBASIC1□□□□□ -2.25
ERCC4Q92889 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
ERCC4Q92889 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
ERCC4Q92889 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
ERCC4Q92889 MIR4639-201ENST00000584938 69 ntBASIC1□□□□□ -2.25
ERCC4Q92889 MIR6767-201ENST00000637302 66 ntBASIC1□□□□□ -2.25
ERCC4Q92889 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
ERCC4Q92889 RNY1P4-201ENST00000384595 115 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 MIR450A2-201ENST00000385022 100 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 MIR1302-4-201ENST00000408701 150 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 RNU6-267P-201ENST00000516714 103 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
ERCC4Q92889 MIR18A-201ENST00000362310 71 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 SNORD18A-201ENST00000363753 72 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 MIR3678-201ENST00000578455 94 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 MIR6515-201ENST00000619843 57 ntBASIC0.98□□□□□ -2.25
ERCC4Q92889 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ERCC4Q92889 RNU6-509P-201ENST00000363519 107 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 SNORD115-24-201ENST00000363528 82 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 Y_RNA.221-201ENST00000364248 96 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.97□□□□□ -2.25
ERCC4Q92889 MIR4536-1-201ENST00000583537 88 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 U6.100-201ENST00000636230 99 ntBASIC0.97□□□□□ -2.25
ERCC4Q92889 SNORD115-27-201ENST00000364430 82 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 RNU6-65P-201ENST00000516332 98 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 RNA5SP47-201ENST00000517230 109 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 AC062037.1-201ENST00000605302 128 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
ERCC4Q92889 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ERCC4Q92889 RNU6-820P-201ENST00000384273 107 ntBASIC0.95□□□□□ -2.26
ERCC4Q92889 MIR520E-201ENST00000384867 87 ntBASIC0.95□□□□□ -2.26
ERCC4Q92889 RNU6-469P-201ENST00000516253 101 ntBASIC0.95□□□□□ -2.26
ERCC4Q92889 RNA5SP480-201ENST00000516840 109 ntBASIC0.95□□□□□ -2.26
ERCC4Q92889 RNU6-132P-201ENST00000383863 107 ntBASIC0.94□□□□□ -2.26
ERCC4Q92889 MIR7-2-201ENST00000384970 110 ntBASIC0.94□□□□□ -2.26
ERCC4Q92889 AC244669.1-204ENST00000621564 178 ntBASIC0.94□□□□□ -2.26
ERCC4Q92889 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 MIR598-201ENST00000384868 97 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 Y_RNA.596-201ENST00000410462 109 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 RNY4P29-201ENST00000410801 97 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 RN7SKP12-201ENST00000516275 143 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms