Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-476P-201ENST00000384726 107 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.809-201ENST00000516058 95 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 MTND5P40-201ENST00000559945 246 ntBASIC0.39□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1064P-201ENST00000410626 104 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 RNU7-106P-201ENST00000459514 67 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 RNA5SP436-201ENST00000516020 115 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-313P-201ENST00000516317 112 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1265P-201ENST00000516342 103 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.78-201ENST00000362970 110 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.115-201ENST00000363272 98 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1254P-201ENST00000391266 104 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 RNU2-51P-201ENST00000410708 197 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 RNA5SP227-201ENST00000516184 113 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 AL162376.1-201ENST00000624117 175 ntBASIC0.37□□□□□ -2.35
HMGCLL1Q8TB92 SNORD36A-201ENST00000362874 73 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1154P-201ENST00000391001 104 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 SPINT5P-201ENST00000448174 155 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 AC067863.3-201ENST00000624172 122 ntBASIC0.36□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.10-201ENST00000362371 110 ntBASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1163P-201ENST00000364516 107 ntBASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1107P-201ENST00000364817 104 ntBASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 RNU6-1014P-201ENST00000383940 103 ntBASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGCLL1Q8TB92 Y_RNA.273-201ENST00000364703 102 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-1056P-201ENST00000383996 107 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 MIR516A2-201ENST00000384888 90 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 MIR516A1-201ENST00000385033 90 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 RNU4-61P-201ENST00000411243 107 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-589P-201ENST00000516485 107 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 AC141557.1-201ENST00000540982 400 ntBASIC0.34□□□□□ -2.36
HMGCLL1Q8TB92 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-1125P-201ENST00000363601 107 ntBASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-480P-201ENST00000384332 107 ntBASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGCLL1Q8TB92 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.57-201ENST00000362806 113 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-1244P-201ENST00000363614 108 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.221-201ENST00000364248 96 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 SNORD115-44-201ENST00000365391 82 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.601-201ENST00000410500 113 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 MIR5706-201ENST00000579841 80 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 MIR3613-201ENST00000579844 87 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 MIR3920-201ENST00000581751 86 ntBASIC0.32□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 SNORD45B-201ENST00000364617 72 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 RNU7-74P-201ENST00000459104 62 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 RNU7-104P-201ENST00000459398 79 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 MTRNR2L2-201ENST00000604882 87 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 AL109933.3-201ENST00000619095 188 ntBASIC0.31□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.68-201ENST00000362881 102 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNU4-36P-201ENST00000364294 144 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-1081P-201ENST00000384537 107 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.629-201ENST00000411368 105 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 AL606753.1-201ENST00000427435 87 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 AC069271.1-201ENST00000445577 156 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNU6-904P-201ENST00000516206 101 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 AC073869.9-201ENST00000641610 120 ntBASIC0.3□□□□□ -2.36
HMGCLL1Q8TB92 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.163-201ENST00000363702 113 ntBASIC0.29□□□□□ -2.36
HMGCLL1Q8TB92 Y_RNA.95-201ENST00000363079 95 ntBASIC0.28□□□□□ -2.36
HMGCLL1Q8TB92 RNU7-13P-201ENST00000516413 62 ntBASIC0.28□□□□□ -2.36
HMGCLL1Q8TB92 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
HMGCLL1Q8TB92 AC109327.2-201ENST00000448339 378 ntBASIC0.27□□□□□ -2.37
HMGCLL1Q8TB92 Y_RNA.648-201ENST00000459455 110 ntBASIC0.27□□□□□ -2.37
HMGCLL1Q8TB92 Y_RNA.709-201ENST00000516952 92 ntBASIC0.27□□□□□ -2.37
HMGCLL1Q8TB92 RNU6-537P-201ENST00000517277 103 ntBASIC0.27□□□□□ -2.37
HMGCLL1Q8TB92 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
HMGCLL1Q8TB92 RNU6-509P-201ENST00000363519 107 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 RNU6-106P-201ENST00000384405 107 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 MIR181B2-201ENST00000385004 89 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 RNU6-269P-201ENST00000391077 97 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 MIR548L-201ENST00000408303 86 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 Y_RNA.659-201ENST00000515994 113 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 Y_RNA.681-201ENST00000516445 113 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 uc_338.28-201ENST00000612082 187 ntBASIC0.26□□□□□ -2.37
HMGCLL1Q8TB92 MIR6129-201ENST00000616087 109 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms