Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
SYNE3Q6ZMZ3 MTND5P40-201ENST00000559945 246 ntBASIC0.39□□□□□ -2.35
SYNE3Q6ZMZ3 MIR5009-201ENST00000578736 100 ntBASIC0.39□□□□□ -2.35
SYNE3Q6ZMZ3 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-832P-201ENST00000363319 107 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-1144P-201ENST00000384247 104 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 SNORD116-21-201ENST00000384507 92 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 MIR6755-201ENST00000619993 66 ntBASIC0.37□□□□□ -2.35
SYNE3Q6ZMZ3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 MIR516A2-201ENST00000384888 90 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 MIR516A1-201ENST00000385033 90 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 SPINT5P-201ENST00000448174 155 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-62P-201ENST00000516526 102 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 AC067863.3-201ENST00000624172 122 ntBASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE3Q6ZMZ3 SNORD36A-201ENST00000362874 73 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-476P-201ENST00000384726 107 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 RNU7-104P-201ENST00000459398 79 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-412P-201ENST00000516434 106 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 RNU6-406P-201ENST00000516470 107 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 AC096720.1-201ENST00000604441 183 ntBASIC0.35□□□□□ -2.35
SYNE3Q6ZMZ3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.34□□□□□ -2.36
SYNE3Q6ZMZ3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.34□□□□□ -2.36
SYNE3Q6ZMZ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.34□□□□□ -2.36
SYNE3Q6ZMZ3 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-716P-201ENST00000365621 103 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-524P-201ENST00000384270 107 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1064P-201ENST00000410626 104 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 MIR4439-201ENST00000583746 80 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
SYNE3Q6ZMZ3 MIR3613-201ENST00000579844 87 ntBASIC0.32□□□□□ -2.36
SYNE3Q6ZMZ3 MIR3920-201ENST00000581751 86 ntBASIC0.32□□□□□ -2.36
SYNE3Q6ZMZ3 Y_RNA.78-201ENST00000362970 110 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 RNA5SP457-201ENST00000363657 124 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1107P-201ENST00000364817 104 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1014P-201ENST00000383940 103 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-789P-201ENST00000517105 102 ntBASIC0.31□□□□□ -2.36
SYNE3Q6ZMZ3 SNORD115-44-201ENST00000365391 82 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 RNU2-51P-201ENST00000410708 197 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-313P-201ENST00000516317 112 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 AC141557.1-201ENST00000540982 400 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 AC073869.9-201ENST00000641610 120 ntBASIC0.3□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1154P-201ENST00000391001 104 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-243P-201ENST00000391140 107 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 RNU7-13P-201ENST00000516413 62 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-589P-201ENST00000516485 107 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 RNA5SP330-201ENST00000517096 96 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 MIR5706-201ENST00000579841 80 ntBASIC0.29□□□□□ -2.36
SYNE3Q6ZMZ3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.28□□□□□ -2.36
SYNE3Q6ZMZ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-1125P-201ENST00000363601 107 ntBASIC0.28□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-480P-201ENST00000384332 107 ntBASIC0.28□□□□□ -2.36
SYNE3Q6ZMZ3 RNU6-269P-201ENST00000391077 97 ntBASIC0.28□□□□□ -2.36
SYNE3Q6ZMZ3 Y_RNA.10-201ENST00000362371 110 ntBASIC0.27□□□□□ -2.37
SYNE3Q6ZMZ3 SNORD45B-201ENST00000364617 72 ntBASIC0.27□□□□□ -2.37
SYNE3Q6ZMZ3 MIR548L-201ENST00000408303 86 ntBASIC0.27□□□□□ -2.37
SYNE3Q6ZMZ3 uc_338.28-201ENST00000612082 187 ntBASIC0.27□□□□□ -2.37
SYNE3Q6ZMZ3 TRDV1-202ENST00000621643 102 ntBASIC0.27□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.273-201ENST00000364703 102 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 RNU6-1056P-201ENST00000383996 107 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 RNU6-815P-201ENST00000384080 113 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 RNU7-74P-201ENST00000459104 62 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 RNU6-904P-201ENST00000516206 101 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.95-201ENST00000363079 95 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.601-201ENST00000410500 113 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 RNU4-61P-201ENST00000411243 107 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 MIR4752-201ENST00000579672 72 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 MIR548AG2-201ENST00000581228 64 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
SYNE3Q6ZMZ3 SNORA9.1-201ENST00000362412 131 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 RNU6-509P-201ENST00000363519 107 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 RNU4-36P-201ENST00000364294 144 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 MIR1197-201ENST00000408818 88 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 AC109327.2-201ENST00000448339 378 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
SYNE3Q6ZMZ3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms