Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR548W-201ENST00000581970 74 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.222-201ENST00000364264 102 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.813-201ENST00000364639 102 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 RNU6-120P-201ENST00000516077 103 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 RNU6-264P-201ENST00000517134 104 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 IGHVII-40-1-201ENST00000517316 58 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 AC138305.3-201ENST00000624988 240 ntBASIC-3.3□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 RNU6-260P-201ENST00000384092 107 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 MIR520D-201ENST00000385002 87 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 RNU6-630P-201ENST00000391258 106 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 RNU6-1148P-201ENST00000410992 104 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 RNU6-75P-201ENST00000515944 104 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.31□□□□□ -2.94
CCDC58Q4VC31 RNU6-766P-201ENST00000362478 107 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 RNU6-478P-201ENST00000363904 110 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.199-201ENST00000364014 102 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 RNU4-24P-201ENST00000364565 139 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.559-201ENST00000384686 107 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 snoU13.10-201ENST00000459301 103 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 FTX_4.1-201ENST00000616291 147 ntBASIC-3.32□□□□□ -2.94
CCDC58Q4VC31 RNU6-978P-201ENST00000364371 103 ntBASIC-3.33□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.482-201ENST00000384377 111 ntBASIC-3.33□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.33□□□□□ -2.94
CCDC58Q4VC31 RNU6-373P-201ENST00000411247 98 ntBASIC-3.33□□□□□ -2.94
CCDC58Q4VC31 AL035461.1-201ENST00000421490 332 ntBASIC-3.33□□□□□ -2.94
CCDC58Q4VC31 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.34□□□□□ -2.94
CCDC58Q4VC31 AL445567.1-201ENST00000439121 144 ntBASIC-3.34□□□□□ -2.94
CCDC58Q4VC31 MIR3140-201ENST00000583685 90 ntBASIC-3.34□□□□□ -2.94
CCDC58Q4VC31 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.34□□□□□ -2.94
CCDC58Q4VC31 RNU6-690P-201ENST00000365242 106 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 SNORA24B-201ENST00000384176 131 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 MT-TT-201ENST00000387460 66 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 AL132765.2-201ENST00000610812 351 ntBASIC-3.35□□□□□ -2.95
CCDC58Q4VC31 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.36□□□□□ -2.95
CCDC58Q4VC31 MIR548F5-201ENST00000408421 86 ntBASIC-3.36□□□□□ -2.95
CCDC58Q4VC31 AL731563.1-201ENST00000442202 214 ntBASIC-3.36□□□□□ -2.95
CCDC58Q4VC31 HSPE1P25-201ENST00000455484 251 ntBASIC-3.36□□□□□ -2.95
CCDC58Q4VC31 AC022079.1-201ENST00000621546 602 ntBASIC-3.36□□□□□ -2.95
CCDC58Q4VC31 SNORA63.2-201ENST00000362603 126 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 Y_RNA.526-201ENST00000384572 110 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 MIR624-201ENST00000385217 97 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 RNU6-101P-201ENST00000410323 104 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 MIR1321-201ENST00000637766 79 ntBASIC-3.37□□□□□ -2.95
CCDC58Q4VC31 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 Y_RNA.39-201ENST00000362620 98 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 RNU6-780P-201ENST00000391030 104 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 VN1R91P-201ENST00000594377 169 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 AC024614.3-201ENST00000637860 256 ntBASIC-3.38□□□□□ -2.95
CCDC58Q4VC31 RNU6-132P-201ENST00000383863 107 ntBASIC-3.39□□□□□ -2.95
CCDC58Q4VC31 SNORA79-201ENST00000408376 140 ntBASIC-3.39□□□□□ -2.95
CCDC58Q4VC31 RNU6-1213P-201ENST00000517075 94 ntBASIC-3.39□□□□□ -2.95
CCDC58Q4VC31 AC124864.2-201ENST00000624736 186 ntBASIC-3.39□□□□□ -2.95
CCDC58Q4VC31 AL606534.2-204ENST00000635008 178 ntBASIC-3.39□□□□□ -2.95
CCDC58Q4VC31 RNY4P9-201ENST00000363194 97 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 RNU6-1090P-201ENST00000364065 94 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 MIR521-2-201ENST00000384818 87 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 MIR203A-201ENST00000384836 110 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 AL021921.1-201ENST00000442774 93 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 AL050303.3-201ENST00000613704 284 ntBASIC-3.4□□□□□ -2.95
CCDC58Q4VC31 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.41□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.41□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.314-201ENST00000365114 102 ntBASIC-3.41□□□□□ -2.96
CCDC58Q4VC31 RNY4P7-201ENST00000364600 96 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 AC096644.2-201ENST00000429278 159 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 MTND3P22-201ENST00000510932 243 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 RNU7-123P-201ENST00000515911 60 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.713-201ENST00000517013 96 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 MIR3657-201ENST00000584818 117 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 AC119751.7-201ENST00000600494 245 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 AC048344.4-201ENST00000619744 527 ntBASIC-3.42□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 RNU6-861P-201ENST00000516745 106 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.43□□□□□ -2.96
CCDC58Q4VC31 RNU6-230P-201ENST00000362457 104 ntBASIC-3.44□□□□□ -2.96
CCDC58Q4VC31 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.44□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms