Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORD116-11-201ENST00000383882 92 ntBASIC-5.33□□□□□ -3.26
RPL39P62891 AC116353.3-201ENST00000511215 249 ntBASIC-5.33□□□□□ -3.26
RPL39P62891 MIR4273-201ENST00000582824 84 ntBASIC-5.33□□□□□ -3.26
RPL39P62891 Y_RNA.282-201ENST00000364793 102 ntBASIC-5.34□□□□□ -3.26
RPL39P62891 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-5.34□□□□□ -3.26
RPL39P62891 MIR548N-201ENST00000408742 75 ntBASIC-5.34□□□□□ -3.26
RPL39P62891 AC092747.3-201ENST00000603769 301 ntBASIC-5.34□□□□□ -3.26
RPL39P62891 AC092794.2-201ENST00000620933 563 ntBASIC-5.34□□□□□ -3.26
RPL39P62891 Y_RNA.24-201ENST00000362508 103 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 MIR548G-201ENST00000408442 89 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 Y_RNA.652-201ENST00000458902 102 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 MIR5701-3-201ENST00000578890 82 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 MIR5701-1-201ENST00000585138 82 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 MIR5701-2-201ENST00000615634 82 ntBASIC-5.35□□□□□ -3.27
RPL39P62891 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-5.36□□□□□ -3.27
RPL39P62891 RNU6-501P-201ENST00000364072 100 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 Y_RNA.301-201ENST00000364990 103 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 RNU6-1051P-201ENST00000365471 102 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 MTND3P2-201ENST00000438452 342 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-5.37□□□□□ -3.27
RPL39P62891 AC006927.2-201ENST00000639256 389 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 AC099654.13-201ENST00000639774 207 ntBASIC-5.37□□□□□ -3.27
RPL39P62891 RNU6-309P-201ENST00000364573 106 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 RNU6-1081P-201ENST00000384537 107 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-5.38□□□□□ -3.27
RPL39P62891 AC082651.2-201ENST00000496833 166 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 MIR4424-201ENST00000585257 86 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 Z84480.1-201ENST00000605131 311 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 AC048344.4-201ENST00000619744 527 ntBASIC-5.38□□□□□ -3.27
RPL39P62891 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-5.39□□□□□ -3.27
RPL39P62891 MTRNR2L9-201ENST00000622562 75 ntBASIC-5.39□□□□□ -3.27
RPL39P62891 MIR379-201ENST00000362218 67 ntBASIC-5.4□□□□□ -3.27
RPL39P62891 SNORD81.1-201ENST00000363064 77 ntBASIC-5.4□□□□□ -3.27
RPL39P62891 RNU6-912P-201ENST00000363800 104 ntBASIC-5.4□□□□□ -3.27
RPL39P62891 RNU6-1028P-201ENST00000517164 93 ntBASIC-5.4□□□□□ -3.27
RPL39P62891 Y_RNA.83-201ENST00000363005 113 ntBASIC-5.41□□□□□ -3.28
RPL39P62891 MIR548U-201ENST00000390728 81 ntBASIC-5.41□□□□□ -3.28
RPL39P62891 RNU6-311P-201ENST00000516224 102 ntBASIC-5.41□□□□□ -3.28
RPL39P62891 MIR3145-201ENST00000580727 82 ntBASIC-5.41□□□□□ -3.28
RPL39P62891 U6.92-201ENST00000636464 89 ntBASIC-5.41□□□□□ -3.28
RPL39P62891 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-5.42□□□□□ -3.28
RPL39P62891 RNU6-530P-201ENST00000391180 107 ntBASIC-5.42□□□□□ -3.28
RPL39P62891 AL118496.2-201ENST00000448300 230 ntBASIC-5.42□□□□□ -3.28
RPL39P62891 SNORD63.2-201ENST00000516303 64 ntBASIC-5.42□□□□□ -3.28
RPL39P62891 RNU6-521P-201ENST00000516663 105 ntBASIC-5.42□□□□□ -3.28
RPL39P62891 Y_RNA.398-201ENST00000383952 99 ntBASIC-5.43□□□□□ -3.28
RPL39P62891 RNU6-95P-201ENST00000384697 107 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 Y_RNA.570-201ENST00000384750 101 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 RNU6-1228P-201ENST00000391014 107 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 RNU6-1248P-201ENST00000391096 64 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 RNU6-976P-201ENST00000516086 111 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 AL365265.1-201ENST00000621045 234 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-5.44□□□□□ -3.28
RPL39P62891 Y_RNA.281-201ENST00000364774 94 ntBASIC-5.45□□□□□ -3.28
RPL39P62891 RNU6-816P-201ENST00000390914 107 ntBASIC-5.45□□□□□ -3.28
RPL39P62891 RNU6-1268P-201ENST00000391214 107 ntBASIC-5.45□□□□□ -3.28
RPL39P62891 RNU6-1239P-201ENST00000391310 107 ntBASIC-5.45□□□□□ -3.28
RPL39P62891 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-5.45□□□□□ -3.28
RPL39P62891 RNU6-669P-201ENST00000365575 107 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 Y_RNA.401-201ENST00000383965 117 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 Y_RNA.434-201ENST00000384090 100 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 RNU6-413P-201ENST00000384115 107 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 RNU6-310P-201ENST00000384655 107 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 AL356010.1-201ENST00000456364 102 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 RNU6-656P-201ENST00000516785 107 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 AL157392.4-201ENST00000609756 345 ntBASIC-5.46□□□□□ -3.28
RPL39P62891 MIR5688-201ENST00000580619 83 ntBASIC-5.47□□□□□ -3.29
RPL39P62891 AC013791.1-201ENST00000616619 62 ntBASIC-5.47□□□□□ -3.29
RPL39P62891 SNORD38.1-201ENST00000363863 68 ntBASIC-5.48□□□□□ -3.29
RPL39P62891 Y_RNA.520-201ENST00000384556 102 ntBASIC-5.48□□□□□ -3.29
RPL39P62891 SNORA79-201ENST00000408376 140 ntBASIC-5.48□□□□□ -3.29
RPL39P62891 RNU7-164P-201ENST00000459221 62 ntBASIC-5.48□□□□□ -3.29
RPL39P62891 MIR3064-201ENST00000581130 66 ntBASIC-5.48□□□□□ -3.29
RPL39P62891 MIR526A2-201ENST00000390198 65 ntBASIC-5.49□□□□□ -3.29
RPL39P62891 RNU7-123P-201ENST00000515911 60 ntBASIC-5.49□□□□□ -3.29
RPL39P62891 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-5.49□□□□□ -3.29
RPL39P62891 AC022079.1-201ENST00000621546 602 ntBASIC-5.49□□□□□ -3.29
RPL39P62891 Y_RNA.63-201ENST00000362841 102 ntBASIC-5.5□□□□□ -3.29
RPL39P62891 Y_RNA.668-201ENST00000516233 93 ntBASIC-5.5□□□□□ -3.29
RPL39P62891 U6.106-201ENST00000636360 105 ntBASIC-5.5□□□□□ -3.29
RPL39P62891 RNY3P3-201ENST00000363816 102 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 RNU6-645P-201ENST00000364649 106 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 Y_RNA.279-201ENST00000364763 95 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 Y_RNA.321-201ENST00000365149 102 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 RNU6-763P-201ENST00000390865 106 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-5.51□□□□□ -3.29
RPL39P62891 RNU6-523P-201ENST00000516304 54 ntBASIC-5.51□□□□□ -3.29
RPL39P62891 SNORD90-201ENST00000391145 111 ntBASIC-5.52□□□□□ -3.29
RPL39P62891 RNU6-587P-201ENST00000391282 106 ntBASIC-5.52□□□□□ -3.29
RPL39P62891 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.52□□□□□ -3.29
RPL39P62891 AC104996.3-201ENST00000590718 94 ntBASIC-5.53□□□□□ -3.29
RPL39P62891 Y_RNA.77-201ENST00000362962 107 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 Y_RNA.325-201ENST00000365171 122 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 Y_RNA.378-201ENST00000365652 113 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 MIR624-201ENST00000385217 97 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 MIR1254-1-201ENST00000408257 97 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 MIR548AJ2-201ENST00000408539 92 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 RNU6-1038P-201ENST00000516516 104 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 AP002963.1-201ENST00000530590 184 ntBASIC-5.54□□□□□ -3.3
RPL39P62891 SNORD115-37-201ENST00000363768 82 ntBASIC-5.55□□□□□ -3.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms