Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIR4677-201ENST00000584153 80 ntBASIC0□□□□□ -2.41
PEX3P56589 AL035470.1-201ENST00000622571 220 ntBASIC0□□□□□ -2.41
PEX3P56589 MIR3914-2-201ENST00000637339 95 ntBASIC0□□□□□ -2.41
PEX3P56589 SNORD50.2-201ENST00000365465 70 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 RNU6-816P-201ENST00000390914 107 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 HMGN2P22-201ENST00000427588 175 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 AC093423.1-201ENST00000440817 142 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 MIR3668-201ENST00000582138 75 ntBASIC-0.01□□□□□ -2.41
PEX3P56589 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.01□□□□□ -2.41
PEX3P56589 AL157777.2-201ENST00000258070 137 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 RNU6-509P-201ENST00000363519 107 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 RNA5SP63-201ENST00000391225 112 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 MIR1912-201ENST00000410389 80 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.02□□□□□ -2.41
PEX3P56589 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.02□□□□□ -2.41
PEX3P56589 AL442128.1-201ENST00000615151 90 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 AL512310.12-203ENST00000640543 90 ntBASIC-0.02□□□□□ -2.41
PEX3P56589 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 SNORD115-44-201ENST00000365391 82 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 RNU6-80P-201ENST00000384195 107 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 MIR519E-201ENST00000385075 84 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 NAMPTP3-201ENST00000569273 224 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 MIR3925-201ENST00000584674 77 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 RNU6-90P-201ENST00000606352 106 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 U7.6-201ENST00000610841 64 ntBASIC-0.03□□□□□ -2.41
PEX3P56589 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.03□□□□□ -2.41
PEX3P56589 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 RNA5SP325-201ENST00000363756 130 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 MIR145-201ENST00000384967 88 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 MIR610-201ENST00000385139 96 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 RNU7-74P-201ENST00000459104 62 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 RNU6-659P-201ENST00000516454 104 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 MIR2909-201ENST00000617113 69 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
PEX3P56589 RNU1-141P-201ENST00000364623 158 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 MIR7-2-201ENST00000384970 110 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 MIR617-201ENST00000385030 97 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 MIR577-201ENST00000385196 96 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 MT-TR-201ENST00000387439 65 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 SNORD110-201ENST00000408189 75 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 AC006210.1-201ENST00000424882 111 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 SPINT5P-201ENST00000448174 155 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 MIR4768-201ENST00000585270 74 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 TRDV1-202ENST00000621643 102 ntBASIC-0.05□□□□□ -2.42
PEX3P56589 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
PEX3P56589 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 SNORD33.1-201ENST00000516213 88 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 MIR4694-201ENST00000578534 80 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 U6.100-201ENST00000636230 99 ntBASIC-0.06□□□□□ -2.42
PEX3P56589 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 RNU6-243P-201ENST00000391140 107 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 MIR876-201ENST00000401147 81 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 MIR892B-201ENST00000401279 77 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 AC007012.1-201ENST00000567192 175 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 MIR3133-201ENST00000583157 78 ntBASIC-0.07□□□□□ -2.42
PEX3P56589 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.08□□□□□ -2.42
PEX3P56589 AL161932.1-201ENST00000437408 146 ntBASIC-0.08□□□□□ -2.42
PEX3P56589 RNU7-165P-201ENST00000458864 60 ntBASIC-0.08□□□□□ -2.42
PEX3P56589 MIR2113-201ENST00000459007 91 ntBASIC-0.08□□□□□ -2.42
PEX3P56589 SNORA25.13-201ENST00000516395 103 ntBASIC-0.08□□□□□ -2.42
PEX3P56589 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-957P-201ENST00000363652 99 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-652P-201ENST00000365488 107 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-746P-201ENST00000384112 109 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-287P-201ENST00000516230 98 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-180P-201ENST00000516697 61 ntBASIC-0.09□□□□□ -2.42
PEX3P56589 RNU6-832P-201ENST00000363319 107 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 RNU6-704P-201ENST00000364162 103 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 SNORA51.5-201ENST00000384126 131 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
PEX3P56589 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 MIR3613-201ENST00000579844 87 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 AC069503.3-201ENST00000618674 145 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 U6.95-201ENST00000636931 70 ntBASIC-0.1□□□□□ -2.43
PEX3P56589 RNY3P2-201ENST00000362918 102 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 SNORD116-14-201ENST00000383894 92 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms