Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR1912-201ENST00000410389 80 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 AP002392.1-201ENST00000537692 208 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 MIR4493-201ENST00000584016 73 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 U6.100-201ENST00000636230 99 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 SNORD114-29-201ENST00000364819 70 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 RNU6-915P-201ENST00000364943 103 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 MIR539-201ENST00000365690 78 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 RNU6-196P-201ENST00000384315 107 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 MT-TY-201ENST00000387409 66 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 RNU6-735P-201ENST00000410612 107 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
PKNOX1P55347 RNU6-694P-201ENST00000364071 147 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 RNU6-154P-201ENST00000384306 106 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 RNU6-480P-201ENST00000384332 107 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 RNU6-861P-201ENST00000516745 106 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 MIR548AZ-201ENST00000616567 95 ntBASIC-0.6□□□□□ -2.51
PKNOX1P55347 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.6□□□□□ -2.51
PKNOX1P55347 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 RNU6-682P-201ENST00000363843 106 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 RNU6-243P-201ENST00000391140 107 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 SNORA7.5-201ENST00000410672 110 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 RNU6-284P-201ENST00000411105 106 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 AL353813.1-201ENST00000440700 253 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 AC114755.3-201ENST00000481111 251 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 SNORA81.3-201ENST00000517283 198 ntBASIC-0.61□□□□□ -2.51
PKNOX1P55347 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.61□□□□□ -2.51
PKNOX1P55347 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 RNA5SP368-201ENST00000364298 116 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 SPINT5P-201ENST00000448174 155 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 RNU7-120P-201ENST00000459334 63 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 RN7SKP19-201ENST00000516016 252 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.62□□□□□ -2.51
PKNOX1P55347 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.63□□□□□ -2.51
PKNOX1P55347 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.63□□□□□ -2.51
PKNOX1P55347 MIR604-201ENST00000384880 94 ntBASIC-0.63□□□□□ -2.51
PKNOX1P55347 AC007012.1-201ENST00000567192 175 ntBASIC-0.63□□□□□ -2.51
PKNOX1P55347 MIR4432-201ENST00000581823 84 ntBASIC-0.63□□□□□ -2.51
PKNOX1P55347 RNU6-957P-201ENST00000363652 99 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 RNU6-151P-201ENST00000364158 107 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 MIR548G-201ENST00000408442 89 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 RNA5SP451-201ENST00000410588 110 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 AL512310.12-203ENST00000640543 90 ntBASIC-0.64□□□□□ -2.51
PKNOX1P55347 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 SNORD38.1-201ENST00000363863 68 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 MIR548D2-201ENST00000384955 97 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 MIR1263-201ENST00000408324 86 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 RNA5SP136-201ENST00000410906 107 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.65□□□□□ -2.51
PKNOX1P55347 RNU6-363P-201ENST00000362895 105 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 MIR759-201ENST00000390224 91 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
PKNOX1P55347 AC074198.2-201ENST00000508153 258 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 RNU6-758P-201ENST00000516292 89 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 RNU6-90P-201ENST00000606352 106 ntBASIC-0.66□□□□□ -2.52
PKNOX1P55347 RNU6-647P-201ENST00000364243 107 ntBASIC-0.67□□□□□ -2.52
PKNOX1P55347 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.67□□□□□ -2.52
PKNOX1P55347 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.67□□□□□ -2.52
PKNOX1P55347 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
PKNOX1P55347 MIR1265-201ENST00000408444 86 ntBASIC-0.67□□□□□ -2.52
PKNOX1P55347 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.68□□□□□ -2.52
PKNOX1P55347 SNORD75.1-201ENST00000408373 60 ntBASIC-0.68□□□□□ -2.52
PKNOX1P55347 RNU6-138P-201ENST00000515952 107 ntBASIC-0.68□□□□□ -2.52
PKNOX1P55347 AP001340.1-201ENST00000624405 217 ntBASIC-0.68□□□□□ -2.52
PKNOX1P55347 MIR20A-201ENST00000362279 71 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 RNU6-200P-201ENST00000364743 107 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 RNU6-463P-201ENST00000384340 107 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 RNU6-35P-201ENST00000384530 107 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 MIR652-201ENST00000385278 98 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 RPS29P8-201ENST00000445109 171 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.69□□□□□ -2.52
PKNOX1P55347 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 RNA5SP66-201ENST00000517178 101 ntBASIC-0.69□□□□□ -2.52
PKNOX1P55347 AP001328.1-201ENST00000528550 176 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms