Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR6759-201ENST00000638110 65 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.27□□□□□ -2.45
LIM2P55344 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.27□□□□□ -2.45
LIM2P55344 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.27□□□□□ -2.45
LIM2P55344 MIR1263-201ENST00000408324 86 ntBASIC-0.27□□□□□ -2.45
LIM2P55344 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
LIM2P55344 SNORD38.1-201ENST00000363863 68 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 MIR516B1-201ENST00000385211 90 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 SNORA7.5-201ENST00000410672 110 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.28□□□□□ -2.45
LIM2P55344 AL512310.12-203ENST00000640543 90 ntBASIC-0.28□□□□□ -2.45
LIM2P55344 SNORD36A-201ENST00000362874 73 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 RNU6-804P-201ENST00000384286 107 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 MIR569-201ENST00000385228 96 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 RNU6-243P-201ENST00000391140 107 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 RNU6-735P-201ENST00000410612 107 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 RNU6-90P-201ENST00000606352 106 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 FTX_2.1-201ENST00000618816 94 ntBASIC-0.29□□□□□ -2.46
LIM2P55344 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.3□□□□□ -2.46
LIM2P55344 RNY4P6-201ENST00000363667 96 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 MIR548G-201ENST00000408442 89 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 SPINT5P-201ENST00000448174 155 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 MIR2113-201ENST00000459007 91 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 uc_338.10-201ENST00000621872 182 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.3□□□□□ -2.46
LIM2P55344 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.31□□□□□ -2.46
LIM2P55344 AL353813.1-201ENST00000440700 253 ntBASIC-0.31□□□□□ -2.46
LIM2P55344 RNU6-287P-201ENST00000516230 98 ntBASIC-0.31□□□□□ -2.46
LIM2P55344 RNU6-781P-201ENST00000516377 101 ntBASIC-0.31□□□□□ -2.46
LIM2P55344 TRDV1-202ENST00000621643 102 ntBASIC-0.31□□□□□ -2.46
LIM2P55344 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.31□□□□□ -2.46
LIM2P55344 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 SNORD114-12-201ENST00000365400 75 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 RNU6-409P-201ENST00000384114 104 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 RNU6-886P-201ENST00000384319 105 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.32□□□□□ -2.46
LIM2P55344 MIR4460-201ENST00000577862 86 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 YWHAEP2-201ENST00000580066 112 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 MIR3666-201ENST00000607845 111 ntBASIC-0.32□□□□□ -2.46
LIM2P55344 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.33□□□□□ -2.46
LIM2P55344 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.33□□□□□ -2.46
LIM2P55344 MIR181B2-201ENST00000385004 89 ntBASIC-0.33□□□□□ -2.46
LIM2P55344 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 MIR106A-201ENST00000384870 81 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 MIR216B-201ENST00000390186 82 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 MIR4473-201ENST00000583731 91 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 AC025166.1-201ENST00000612411 163 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 RN7SL660P-201ENST00000614852 299 ntBASIC-0.34□□□□□ -2.46
LIM2P55344 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 SNORD114-29-201ENST00000364819 70 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 SNORA51.5-201ENST00000384126 131 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 MT-TY-201ENST00000387409 66 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 AL442128.1-201ENST00000615151 90 ntBASIC-0.35□□□□□ -2.47
LIM2P55344 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 SNORD58C-201ENST00000365223 64 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 RNU7-188P-201ENST00000517063 64 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 MTND5P41-201ENST00000517498 206 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 U6.100-201ENST00000636230 99 ntBASIC-0.36□□□□□ -2.47
LIM2P55344 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 RNU6-816P-201ENST00000390914 107 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 MIR1912-201ENST00000410389 80 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 AL161932.1-201ENST00000437408 146 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 AC007012.1-201ENST00000567192 175 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 MIR4263-201ENST00000584745 83 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 MIR6507-201ENST00000613630 70 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 AL162726.3-218ENST00000636401 95 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 MTND5P18-201ENST00000445624 1801 ntBASIC-0.37□□□□□ -2.47
LIM2P55344 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 RNU6-957P-201ENST00000363652 99 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 snosnR66.1-201ENST00000391095 99 ntBASIC-0.38□□□□□ -2.47
LIM2P55344 MIR655-201ENST00000362159 97 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-235P-201ENST00000362644 107 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNA5SP98-201ENST00000363158 137 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms