Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU7-106P-201ENST00000459514 67 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 MIR4743-201ENST00000584576 69 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR516A2-201ENST00000384888 90 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR516A1-201ENST00000385033 90 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR569-201ENST00000385228 96 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR519A1-201ENST00000385257 85 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNA5SP272-201ENST00000516095 111 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 NAMPTP3-201ENST00000569273 224 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR548D2-201ENST00000384955 97 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR501-201ENST00000390204 84 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MTND5P41-201ENST00000517498 206 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 RNU6-235P-201ENST00000362644 107 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 RNU6-781P-201ENST00000516377 101 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 MIR3920-201ENST00000581751 86 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.11□□□□□ -2.43
LIMK1P53667 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNY4P6-201ENST00000363667 96 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNU6-735P-201ENST00000410612 107 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNA5SP67-201ENST00000516422 131 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNU6-426P-201ENST00000516464 97 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 MIR409-201ENST00000362237 79 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 MIR101-1-201ENST00000362265 75 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-409P-201ENST00000384114 104 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-243P-201ENST00000391140 107 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNA5SP484-201ENST00000458857 111 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 MIR548AD-201ENST00000584780 82 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-90P-201ENST00000606352 106 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 uc_338.28-201ENST00000612082 187 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 AC025166.1-201ENST00000612411 163 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-363P-201ENST00000362895 105 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 snoU13.11-201ENST00000459219 104 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 MIR4677-201ENST00000584153 80 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 AC084368.1-201ENST00000620935 65 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 RNU6-929P-201ENST00000384429 107 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 RPS29P8-201ENST00000445109 171 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
LIMK1P53667 MTND5P18-201ENST00000445624 1801 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-161P-201ENST00000363051 106 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORD38.1-201ENST00000363863 68 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORD115-44-201ENST00000365391 82 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-46P-201ENST00000383860 107 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORA40-201ENST00000388090 126 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 MIR548G-201ENST00000408442 89 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 SNORA75.1-201ENST00000391130 148 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 HMGN2P22-201ENST00000427588 175 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 SNORD114-28-201ENST00000363610 72 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU1-141P-201ENST00000364623 158 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 SNORD58C-201ENST00000365223 64 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-816P-201ENST00000390914 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 MTND4LP9-201ENST00000427694 174 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 MIR3925-201ENST00000584674 77 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 MIR516B1-201ENST00000385211 90 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU7-200P-201ENST00000516105 62 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU6-794P-201ENST00000517261 64 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 MIR617-201ENST00000385030 97 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.21□□□□□ -2.44
LIMK1P53667 SNORA25.13-201ENST00000516395 103 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 RNU7-165P-201ENST00000458864 60 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.44
LIMK1P53667 AL442128.1-201ENST00000615151 90 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 TRDV1-202ENST00000621643 102 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 MIR6514-201ENST00000622549 70 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms