Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AC073261.1-201ENST00000429409 121 ntBASIC0.31□□□□□ -2.36
PRIM2P49643 RNU6-1265P-201ENST00000516342 103 ntBASIC0.31□□□□□ -2.36
PRIM2P49643 AL365222.1-201ENST00000614661 98 ntBASIC0.31□□□□□ -2.36
PRIM2P49643 RNU6-834P-201ENST00000362367 110 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 Y_RNA.10-201ENST00000362371 110 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 SNORA2A-201ENST00000383885 135 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 Y_RNA.423-201ENST00000384057 113 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 RNU6-22P-201ENST00000384355 107 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.3□□□□□ -2.36
PRIM2P49643 AC141557.1-201ENST00000540982 400 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 MIR4439-201ENST00000583746 80 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.3□□□□□ -2.36
PRIM2P49643 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 RNU6-1168P-201ENST00000390831 104 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.29□□□□□ -2.36
PRIM2P49643 RNU6-479P-201ENST00000516348 105 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 MIR5706-201ENST00000579841 80 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 MIR4315-1-201ENST00000636800 73 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 MIR4315-2-201ENST00000640925 73 ntBASIC0.29□□□□□ -2.36
PRIM2P49643 SNORD36A-201ENST00000362874 73 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 RNU6-509P-201ENST00000363519 107 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 RNA5SP205-201ENST00000364653 136 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 RNU6-1144P-201ENST00000384247 104 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 MIR598-201ENST00000384868 97 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 Y_RNA.659-201ENST00000515994 113 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 MIR3920-201ENST00000581751 86 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
PRIM2P49643 Y_RNA.163-201ENST00000363702 113 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 RNU4-36P-201ENST00000364294 144 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 SNORD45B-201ENST00000364617 72 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 RNU6-476P-201ENST00000384726 107 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 RNU6-1064P-201ENST00000410626 104 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.27□□□□□ -2.37
PRIM2P49643 U7.6-201ENST00000610841 64 ntBASIC0.27□□□□□ -2.37
PRIM2P49643 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
PRIM2P49643 RNU6-1107P-201ENST00000364817 104 ntBASIC0.26□□□□□ -2.37
PRIM2P49643 RNU6-313P-201ENST00000516317 112 ntBASIC0.26□□□□□ -2.37
PRIM2P49643 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.26□□□□□ -2.37
PRIM2P49643 RNU6-1163P-201ENST00000364516 107 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 RNU6-1014P-201ENST00000383940 103 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 MIR760-201ENST00000390220 80 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 RNU6-1154P-201ENST00000391001 104 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 RNU6-789P-201ENST00000517105 102 ntBASIC0.25□□□□□ -2.37
PRIM2P49643 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
PRIM2P49643 SNORD113-1-201ENST00000365321 69 ntBASIC0.24□□□□□ -2.37
PRIM2P49643 RNU6-1056P-201ENST00000383996 107 ntBASIC0.24□□□□□ -2.37
PRIM2P49643 RNU6-269P-201ENST00000391077 97 ntBASIC0.24□□□□□ -2.37
PRIM2P49643 MIR4752-201ENST00000579672 72 ntBASIC0.24□□□□□ -2.37
PRIM2P49643 RNU6-1244P-201ENST00000363614 108 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 RNA5SP128-201ENST00000365305 116 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 RNU6-466P-201ENST00000391224 103 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 PVT1_3.1-201ENST00000620853 95 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 TRDV1-202ENST00000621643 102 ntBASIC0.23□□□□□ -2.37
PRIM2P49643 MIR489-201ENST00000384923 84 ntBASIC0.22□□□□□ -2.37
PRIM2P49643 SNORD114-23-201ENST00000363536 72 ntBASIC0.21□□□□□ -2.38
PRIM2P49643 Y_RNA.601-201ENST00000410500 113 ntBASIC0.21□□□□□ -2.38
PRIM2P49643 AC109327.2-201ENST00000448339 378 ntBASIC0.21□□□□□ -2.38
PRIM2P49643 RNU1-29P-201ENST00000606574 126 ntBASIC0.21□□□□□ -2.38
PRIM2P49643 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.21□□□□□ -2.38
PRIM2P49643 Y_RNA.78-201ENST00000362970 110 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 Y_RNA.118-201ENST00000363300 101 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 MIR181B2-201ENST00000385004 89 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 MIR617-201ENST00000385030 97 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 Y_RNA.596-201ENST00000410462 109 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 RNU2-51P-201ENST00000410708 197 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
PRIM2P49643 Y_RNA.95-201ENST00000363079 95 ntBASIC0.19□□□□□ -2.38
PRIM2P49643 AC006210.1-201ENST00000424882 111 ntBASIC0.19□□□□□ -2.38
PRIM2P49643 uc_338.28-201ENST00000612082 187 ntBASIC0.19□□□□□ -2.38
PRIM2P49643 AC010487.4-201ENST00000637027 61 ntBASIC0.19□□□□□ -2.38
PRIM2P49643 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
PRIM2P49643 MIR1302-5-201ENST00000408164 150 ntBASIC0.18□□□□□ -2.38
PRIM2P49643 RN7SL793P-201ENST00000583259 296 ntBASIC0.18□□□□□ -2.38
PRIM2P49643 RNU6-86P-201ENST00000606534 107 ntBASIC0.18□□□□□ -2.38
PRIM2P49643 SNORD110-201ENST00000408189 75 ntBASIC0.17□□□□□ -2.38
PRIM2P49643 Y_RNA.648-201ENST00000459455 110 ntBASIC0.17□□□□□ -2.38
PRIM2P49643 MIR3613-201ENST00000579844 87 ntBASIC0.17□□□□□ -2.38
PRIM2P49643 SNORA70.25-201ENST00000612741 95 ntBASIC0.17□□□□□ -2.38
PRIM2P49643 Y_RNA.96-201ENST00000363092 109 ntBASIC0.16□□□□□ -2.38
PRIM2P49643 RNU6-957P-201ENST00000363652 99 ntBASIC0.16□□□□□ -2.38
PRIM2P49643 RNU6-813P-201ENST00000384691 107 ntBASIC0.16□□□□□ -2.38
PRIM2P49643 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
PRIM2P49643 RNU6-1113P-201ENST00000384348 107 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 MIR2113-201ENST00000459007 91 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 NAMPTP3-201ENST00000569273 224 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 MTRNR2L2-201ENST00000604882 87 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
PRIM2P49643 RNU1-141P-201ENST00000364623 158 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 Y_RNA.273-201ENST00000364703 102 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 Y_RNA.283-201ENST00000364798 112 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 MIR519E-201ENST00000385075 84 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 RNU6-127P-201ENST00000390897 107 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PRIM2P49643 RNU4-61P-201ENST00000411243 107 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 253.4 ms