Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 RNU6-726P-201ENST00000364680 107 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 RNU6-1107P-201ENST00000364817 104 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 RNU6-1254P-201ENST00000391266 104 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 RNU2-59P-201ENST00000410482 191 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 Y_RNA.629-201ENST00000411368 105 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 RNU7-106P-201ENST00000459514 67 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 Y_RNA.809-201ENST00000516058 95 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.38□□□□□ -2.35
NKX2-1P43699 SNORD115-24-201ENST00000363528 82 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 RNU6-1163P-201ENST00000364516 107 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 MIR599-201ENST00000385069 95 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 Y_RNA.601-201ENST00000410500 113 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.37□□□□□ -2.35
NKX2-1P43699 RNU6-1265P-201ENST00000516342 103 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 AL162376.1-201ENST00000624117 175 ntBASIC0.37□□□□□ -2.35
NKX2-1P43699 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 Y_RNA.68-201ENST00000362881 102 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 RNU6-1125P-201ENST00000363601 107 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 Y_RNA.178-201ENST00000363832 102 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 RNU6-480P-201ENST00000384332 107 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
NKX2-1P43699 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 AC141557.1-201ENST00000540982 400 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 MIR6513-201ENST00000621188 64 ntBASIC0.36□□□□□ -2.35
NKX2-1P43699 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 Y_RNA.374-201ENST00000365606 101 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 RNU6-716P-201ENST00000365621 103 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 SPINT5P-201ENST00000448174 155 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 RNU7-195P-201ENST00000458793 62 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 MTRNR2L2-201ENST00000604882 87 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 MIR7107-201ENST00000611489 80 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
NKX2-1P43699 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 SNORD45B-201ENST00000364617 72 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 SNORD115-44-201ENST00000365391 82 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 MIR516A2-201ENST00000384888 90 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 MIR516A1-201ENST00000385033 90 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 MIR5706-201ENST00000579841 80 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 MIR3613-201ENST00000579844 87 ntBASIC0.34□□□□□ -2.36
NKX2-1P43699 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 RNU6-1244P-201ENST00000363614 108 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 RNU4-36P-201ENST00000364294 144 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 RNU6-243P-201ENST00000391140 107 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
NKX2-1P43699 RNU6-904P-201ENST00000516206 101 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 Y_RNA.709-201ENST00000516952 92 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 RNU6-537P-201ENST00000517277 103 ntBASIC0.33□□□□□ -2.36
NKX2-1P43699 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
NKX2-1P43699 Y_RNA.57-201ENST00000362806 113 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 Y_RNA.95-201ENST00000363079 95 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 RNU6-1113P-201ENST00000384348 107 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 RNU7-74P-201ENST00000459104 62 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 RNA5SP227-201ENST00000516184 113 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 MIR3920-201ENST00000581751 86 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 PVT1_3.1-201ENST00000620853 95 ntBASIC0.32□□□□□ -2.36
NKX2-1P43699 RNU6-106P-201ENST00000384405 107 ntBASIC0.31□□□□□ -2.36
NKX2-1P43699 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
NKX2-1P43699 Y_RNA.96-201ENST00000363092 109 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 Y_RNA.163-201ENST00000363702 113 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 RNU6-755P-201ENST00000364400 103 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 Y_RNA.433-201ENST00000384089 102 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 MIR1302-5-201ENST00000408164 150 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 SNORA25.18-201ENST00000607153 114 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 AC073869.9-201ENST00000641610 120 ntBASIC0.3□□□□□ -2.36
NKX2-1P43699 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 Y_RNA.221-201ENST00000364248 96 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 RNU6-813P-201ENST00000384691 107 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 AC109327.2-201ENST00000448339 378 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 Y_RNA.648-201ENST00000459455 110 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.29□□□□□ -2.36
NKX2-1P43699 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 RNA5SP395-201ENST00000516567 118 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 MIR548AI-201ENST00000579940 88 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 RNU1-29P-201ENST00000606574 126 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 MIR6129-201ENST00000616087 109 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 Y_RNA.818-201ENST00000618813 71 ntBASIC0.29□□□□□ -2.36
NKX2-1P43699 RNA5SP98-201ENST00000363158 137 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 Y_RNA.291-201ENST00000364886 113 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 Y_RNA.540-201ENST00000384638 111 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 SNORA19-201ENST00000384737 128 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 RNU6-644P-201ENST00000391155 98 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 SCARNA23-201ENST00000516060 130 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 RNU7-13P-201ENST00000516413 62 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 RNU6-158P-201ENST00000517104 100 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 MIR4777-201ENST00000583710 86 ntBASIC0.28□□□□□ -2.36
NKX2-1P43699 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms