Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNORD115-44-201ENST00000365391 82 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR516A2-201ENST00000384888 90 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR516A1-201ENST00000385033 90 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 RNU6-816P-201ENST00000390914 107 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 RNU6-1268P-201ENST00000391214 107 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 RNU6-1254P-201ENST00000391266 104 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 RNU6-1239P-201ENST00000391310 107 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR548G-201ENST00000408442 89 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 MIR3920-201ENST00000581751 86 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
ABCD3P28288 Y_RNA.586-201ENST00000391146 98 ntBASIC0.03□□□□□ -2.4
ABCD3P28288 RNA5SP395-201ENST00000516567 118 ntBASIC0.03□□□□□ -2.4
ABCD3P28288 RNU6-782P-201ENST00000516852 104 ntBASIC0.03□□□□□ -2.4
ABCD3P28288 SNORA70.25-201ENST00000612741 95 ntBASIC0.03□□□□□ -2.4
ABCD3P28288 Y_RNA.57-201ENST00000362806 113 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 RNU6-652P-201ENST00000365488 107 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 RNU6-907P-201ENST00000390924 102 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 RNU6-243P-201ENST00000391140 107 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.02□□□□□ -2.41
ABCD3P28288 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCD3P28288 MIR4679-2-201ENST00000578358 77 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 uc_338.28-201ENST00000612082 187 ntBASIC0.02□□□□□ -2.41
ABCD3P28288 Y_RNA.309-201ENST00000365046 111 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 RNU6-80P-201ENST00000384195 107 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 RNU6-1201P-201ENST00000384227 107 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 AC006210.1-201ENST00000424882 111 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 AL353813.1-201ENST00000440700 253 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 RNU6-971P-201ENST00000516920 106 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 AL442128.1-201ENST00000615151 90 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCD3P28288 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
ABCD3P28288 Y_RNA.173-201ENST00000363776 113 ntBASIC0□□□□□ -2.41
ABCD3P28288 SNORD50.2-201ENST00000365465 70 ntBASIC0□□□□□ -2.41
ABCD3P28288 MIR501-201ENST00000390204 84 ntBASIC0□□□□□ -2.41
ABCD3P28288 Y_RNA.630-201ENST00000411370 108 ntBASIC0□□□□□ -2.41
ABCD3P28288 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0□□□□□ -2.41
ABCD3P28288 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
ABCD3P28288 Y_RNA.703-201ENST00000516846 111 ntBASIC0□□□□□ -2.41
ABCD3P28288 AC141557.1-201ENST00000540982 400 ntBASIC0□□□□□ -2.41
ABCD3P28288 MIR548AD-201ENST00000584780 82 ntBASIC0□□□□□ -2.41
ABCD3P28288 AC096720.1-201ENST00000604441 183 ntBASIC0□□□□□ -2.41
ABCD3P28288 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.01□□□□□ -2.41
ABCD3P28288 MIR643-201ENST00000385267 97 ntBASIC-0.01□□□□□ -2.41
ABCD3P28288 SNORD110-201ENST00000408189 75 ntBASIC-0.01□□□□□ -2.41
ABCD3P28288 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.01□□□□□ -2.41
ABCD3P28288 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
ABCD3P28288 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.01□□□□□ -2.41
ABCD3P28288 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
ABCD3P28288 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.02□□□□□ -2.41
ABCD3P28288 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.02□□□□□ -2.41
ABCD3P28288 U6.95-201ENST00000636931 70 ntBASIC-0.02□□□□□ -2.41
ABCD3P28288 MIR3914-2-201ENST00000637339 95 ntBASIC-0.02□□□□□ -2.41
ABCD3P28288 RNU6-35P-201ENST00000384530 107 ntBASIC-0.03□□□□□ -2.41
ABCD3P28288 RNU7-107P-201ENST00000459121 61 ntBASIC-0.03□□□□□ -2.41
ABCD3P28288 SNORD36A-201ENST00000362874 73 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 MIR617-201ENST00000385030 97 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 RNA5SP484-201ENST00000458857 111 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 AC007012.1-201ENST00000567192 175 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 MIR6759-201ENST00000638110 65 ntBASIC-0.04□□□□□ -2.42
ABCD3P28288 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
ABCD3P28288 MIR4694-201ENST00000578534 80 ntBASIC-0.05□□□□□ -2.42
ABCD3P28288 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
ABCD3P28288 TRDV1-202ENST00000621643 102 ntBASIC-0.05□□□□□ -2.42
ABCD3P28288 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 RNU6-746P-201ENST00000384112 109 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 RNU6-480P-201ENST00000384332 107 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 MIR4677-201ENST00000584153 80 ntBASIC-0.06□□□□□ -2.42
ABCD3P28288 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.07□□□□□ -2.42
ABCD3P28288 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.07□□□□□ -2.42
ABCD3P28288 MIR3133-201ENST00000583157 78 ntBASIC-0.07□□□□□ -2.42
ABCD3P28288 RNU1-141P-201ENST00000364623 158 ntBASIC-0.08□□□□□ -2.42
ABCD3P28288 MIR593-201ENST00000384856 100 ntBASIC-0.08□□□□□ -2.42
ABCD3P28288 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ABCD3P28288 SNORA75.1-201ENST00000391130 148 ntBASIC-0.08□□□□□ -2.42
ABCD3P28288 RNU6-659P-201ENST00000516454 104 ntBASIC-0.08□□□□□ -2.42
ABCD3P28288 AL035470.1-201ENST00000622571 220 ntBASIC-0.08□□□□□ -2.42
ABCD3P28288 RNU6-161P-201ENST00000363051 106 ntBASIC-0.09□□□□□ -2.42
ABCD3P28288 RNU6-704P-201ENST00000364162 103 ntBASIC-0.09□□□□□ -2.42
ABCD3P28288 MIR519E-201ENST00000385075 84 ntBASIC-0.09□□□□□ -2.42
ABCD3P28288 MIR548H2-201ENST00000408874 88 ntBASIC-0.09□□□□□ -2.42
ABCD3P28288 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.09□□□□□ -2.42
ABCD3P28288 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 MIR577-201ENST00000385196 96 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 MIR548A3-201ENST00000385297 97 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 RNU6-466P-201ENST00000391224 103 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 HMGN2P22-201ENST00000427588 175 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 MIR2113-201ENST00000459007 91 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 SNORA25.13-201ENST00000516395 103 ntBASIC-0.1□□□□□ -2.43
ABCD3P28288 AC068339.1-201ENST00000526965 141 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms