Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNU6-957P-201ENST00000363652 99 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 SNORD115-37-201ENST00000363768 82 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 RNA5SP245-201ENST00000364239 121 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 SNORD114-24-201ENST00000365029 72 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 RNU6-979P-201ENST00000383896 107 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 Y_RNA.426-201ENST00000384068 113 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 MIR1236-201ENST00000408340 102 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
ATP2B4P23634 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
ATP2B4P23634 RNU4-32P-201ENST00000363404 141 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 SNORD115-27-201ENST00000364430 82 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 RNU6-1276P-201ENST00000365372 104 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 SNORD114-22-201ENST00000365423 72 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 RNU6-592P-201ENST00000411333 103 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 AC244505.6-201ENST00000452829 130 ntBASIC1.55□□□□□ -2.16
ATP2B4P23634 MIR96-201ENST00000362288 78 ntBASIC1.54□□□□□ -2.16
ATP2B4P23634 AC025627.3-201ENST00000582078 182 ntBASIC1.54□□□□□ -2.16
ATP2B4P23634 TRDV1-202ENST00000621643 102 ntBASIC1.54□□□□□ -2.16
ATP2B4P23634 uc_338.16-201ENST00000621804 95 ntBASIC1.54□□□□□ -2.16
ATP2B4P23634 Y_RNA.32-201ENST00000362589 110 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 RNU6-573P-201ENST00000383938 106 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 RNU6-811P-201ENST00000384069 107 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 RNU6-524P-201ENST00000384270 107 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 SNORA31.14-201ENST00000516728 116 ntBASIC1.53□□□□□ -2.16
ATP2B4P23634 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
ATP2B4P23634 MIR489-201ENST00000384923 84 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 MIR548U-201ENST00000390728 81 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 snoU13.18-201ENST00000459483 104 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 RNU7-171P-201ENST00000459581 62 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 AC002350.1-201ENST00000490759 375 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 RNU6-75P-201ENST00000515944 104 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 AC006160.2-201ENST00000637708 154 ntBASIC1.52□□□□□ -2.17
ATP2B4P23634 Y_RNA.219-201ENST00000364232 113 ntBASIC1.51□□□□□ -2.17
ATP2B4P23634 RNA5SP117-201ENST00000365294 118 ntBASIC1.51□□□□□ -2.17
ATP2B4P23634 AC093729.1-201ENST00000513074 128 ntBASIC1.5□□□□□ -2.17
ATP2B4P23634 MIR1245B-201ENST00000636115 69 ntBASIC1.5□□□□□ -2.17
ATP2B4P23634 RNU6-135P-201ENST00000516769 101 ntBASIC1.49□□□□□ -2.17
ATP2B4P23634 MIR3202-2-201ENST00000635980 79 ntBASIC1.49□□□□□ -2.17
ATP2B4P23634 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ATP2B4P23634 Y_RNA.221-201ENST00000364248 96 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 RNU1-93P-201ENST00000364704 169 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ATP2B4P23634 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 RNA5SP255-201ENST00000516370 107 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 AC104996.3-201ENST00000590718 94 ntBASIC1.48□□□□□ -2.17
ATP2B4P23634 Y_RNA.607-201ENST00000410597 98 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 AL606490.4-201ENST00000423117 127 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 RNU6-469P-201ENST00000516253 101 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 RNU6-1265P-201ENST00000516342 103 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 MIR3064-201ENST00000581130 66 ntBASIC1.47□□□□□ -2.17
ATP2B4P23634 MIR573-201ENST00000384964 99 ntBASIC1.46□□□□□ -2.18
ATP2B4P23634 RNU6-132P-201ENST00000383863 107 ntBASIC1.45□□□□□ -2.18
ATP2B4P23634 MIRLET7F1-201ENST00000362202 87 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 SNORD115-24-201ENST00000363528 82 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 RNU6-1335P-201ENST00000365426 107 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 Y_RNA.596-201ENST00000410462 109 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 RNU7-153P-201ENST00000516455 62 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 MIR4666B-201ENST00000578142 81 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 MIR4796-201ENST00000580742 81 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 U6.100-201ENST00000636230 99 ntBASIC1.44□□□□□ -2.18
ATP2B4P23634 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 Y_RNA.239-201ENST00000364444 113 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 SNORD101-201ENST00000384027 73 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 RNU6-42P-201ENST00000384165 107 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 Y_RNA.491-201ENST00000384417 107 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 SNORD78.1-201ENST00000390866 65 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 RNA5SP292-201ENST00000390974 118 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.43□□□□□ -2.18
ATP2B4P23634 RNA5SP220-201ENST00000516298 104 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
ATP2B4P23634 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ATP2B4P23634 SNORA18.5-201ENST00000516616 101 ntBASIC1.42□□□□□ -2.18
ATP2B4P23634 AC140658.3-201ENST00000567603 271 ntBASIC1.42□□□□□ -2.18
ATP2B4P23634 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
ATP2B4P23634 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
ATP2B4P23634 RNU6-664P-201ENST00000362381 107 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 Y_RNA.437-201ENST00000384113 113 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 MIR520E-201ENST00000384867 87 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ATP2B4P23634 SNORA25.13-201ENST00000516395 103 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 MIR3612-201ENST00000579753 87 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 MTRNR2L2-201ENST00000604882 87 ntBASIC1.41□□□□□ -2.18
ATP2B4P23634 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
ATP2B4P23634 SNORD115-44-201ENST00000365391 82 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 RNU6-1124P-201ENST00000384169 107 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 MIR644A-201ENST00000385262 94 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 AC087343.1-201ENST00000477341 475 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 MIR4696-201ENST00000581431 70 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 MIR6767-201ENST00000637302 66 ntBASIC1.4□□□□□ -2.19
ATP2B4P23634 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
ATP2B4P23634 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
ATP2B4P23634 RNA5SP403-201ENST00000363598 108 ntBASIC1.39□□□□□ -2.19
ATP2B4P23634 SNORD99-201ENST00000408612 74 ntBASIC1.39□□□□□ -2.19
ATP2B4P23634 RNU7-13P-201ENST00000516413 62 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms