Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-1265P-201ENST00000516342 103 ntBASIC0.28□□□□□ -2.36
TNFSF4P23510 RNU6-62P-201ENST00000516526 102 ntBASIC0.28□□□□□ -2.36
TNFSF4P23510 AC069113.3-201ENST00000521019 150 ntBASIC0.28□□□□□ -2.36
TNFSF4P23510 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 SNORD116-21-201ENST00000384507 92 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 RNU6-1117P-201ENST00000384525 104 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 MIR3910-1-201ENST00000580936 111 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 AC132825.6-201ENST00000638861 357 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
TNFSF4P23510 RNU6-1125P-201ENST00000363601 107 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 Y_RNA.261-201ENST00000364631 102 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 SNORD115-44-201ENST00000365391 82 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 RNU6-815P-201ENST00000384080 113 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 RNU6-480P-201ENST00000384332 107 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
TNFSF4P23510 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.26□□□□□ -2.37
TNFSF4P23510 SNORD36A-201ENST00000362874 73 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 RNU6-509P-201ENST00000363519 107 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 MIR760-201ENST00000390220 80 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 MIR5706-201ENST00000579841 80 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 MIR3920-201ENST00000581751 86 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 AL365222.1-201ENST00000614661 98 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
TNFSF4P23510 MIR489-201ENST00000384923 84 ntBASIC0.24□□□□□ -2.37
TNFSF4P23510 Y_RNA.659-201ENST00000515994 113 ntBASIC0.24□□□□□ -2.37
TNFSF4P23510 AC141557.1-201ENST00000540982 400 ntBASIC0.24□□□□□ -2.37
TNFSF4P23510 MIR4752-201ENST00000579672 72 ntBASIC0.24□□□□□ -2.37
TNFSF4P23510 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
TNFSF4P23510 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
TNFSF4P23510 RNU6-269P-201ENST00000391077 97 ntBASIC0.23□□□□□ -2.37
TNFSF4P23510 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.23□□□□□ -2.37
TNFSF4P23510 MIR4439-201ENST00000583746 80 ntBASIC0.23□□□□□ -2.37
TNFSF4P23510 PVT1_3.1-201ENST00000620853 95 ntBASIC0.23□□□□□ -2.37
TNFSF4P23510 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TNFSF4P23510 Y_RNA.10-201ENST00000362371 110 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 Y_RNA.163-201ENST00000363702 113 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 RNU6-1163P-201ENST00000364516 107 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 SNORD45B-201ENST00000364617 72 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 RNU6-1144P-201ENST00000384247 104 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 RNU6-22P-201ENST00000384355 107 ntBASIC0.22□□□□□ -2.37
TNFSF4P23510 RNA5SP205-201ENST00000364653 136 ntBASIC0.21□□□□□ -2.38
TNFSF4P23510 RNY1P4-201ENST00000384595 115 ntBASIC0.21□□□□□ -2.38
TNFSF4P23510 RNU6-476P-201ENST00000384726 107 ntBASIC0.21□□□□□ -2.38
TNFSF4P23510 RNU6-1168P-201ENST00000390831 104 ntBASIC0.21□□□□□ -2.38
TNFSF4P23510 RNU1-29P-201ENST00000606574 126 ntBASIC0.21□□□□□ -2.38
TNFSF4P23510 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.21□□□□□ -2.38
TNFSF4P23510 RNU6-834P-201ENST00000362367 110 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU4-36P-201ENST00000364294 144 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU6-1107P-201ENST00000364817 104 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU6-1014P-201ENST00000383940 103 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU6-479P-201ENST00000516348 105 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 TRDV1-202ENST00000621643 102 ntBASIC0.2□□□□□ -2.38
TNFSF4P23510 RNU6-1244P-201ENST00000363614 108 ntBASIC0.19□□□□□ -2.38
TNFSF4P23510 RNU6-466P-201ENST00000391224 103 ntBASIC0.19□□□□□ -2.38
TNFSF4P23510 RNU6-1064P-201ENST00000410626 104 ntBASIC0.19□□□□□ -2.38
TNFSF4P23510 Y_RNA.36-201ENST00000362602 112 ntBASIC0.18□□□□□ -2.38
TNFSF4P23510 Y_RNA.78-201ENST00000362970 110 ntBASIC0.18□□□□□ -2.38
TNFSF4P23510 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.18□□□□□ -2.38
TNFSF4P23510 RNU6-313P-201ENST00000516317 112 ntBASIC0.18□□□□□ -2.38
TNFSF4P23510 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
TNFSF4P23510 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 MIR193B-201ENST00000384907 83 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 MIR181B2-201ENST00000385004 89 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 MIR617-201ENST00000385030 97 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 Y_RNA.596-201ENST00000410462 109 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 AC109327.2-201ENST00000448339 378 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 uc_338.28-201ENST00000612082 187 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 SNORA70.25-201ENST00000612741 95 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
TNFSF4P23510 RNU6-1154P-201ENST00000391001 104 ntBASIC0.16□□□□□ -2.38
TNFSF4P23510 AC006210.1-201ENST00000424882 111 ntBASIC0.16□□□□□ -2.38
TNFSF4P23510 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
TNFSF4P23510 Y_RNA.95-201ENST00000363079 95 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 SNORD113-1-201ENST00000365321 69 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 RNU6-1056P-201ENST00000383996 107 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 SNORD110-201ENST00000408189 75 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 Y_RNA.601-201ENST00000410500 113 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 RNU6-86P-201ENST00000606534 107 ntBASIC0.15□□□□□ -2.39
TNFSF4P23510 RNU6-127P-201ENST00000390897 107 ntBASIC0.14□□□□□ -2.39
TNFSF4P23510 RNA5SP484-201ENST00000458857 111 ntBASIC0.14□□□□□ -2.39
TNFSF4P23510 NAMPTP3-201ENST00000569273 224 ntBASIC0.14□□□□□ -2.39
TNFSF4P23510 MIR3613-201ENST00000579844 87 ntBASIC0.14□□□□□ -2.39
TNFSF4P23510 RNU6-957P-201ENST00000363652 99 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 MIR2113-201ENST00000459007 91 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 Y_RNA.648-201ENST00000459455 110 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 RNU6-789P-201ENST00000517105 102 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 MIR7111-201ENST00000619751 72 ntBASIC0.13□□□□□ -2.39
TNFSF4P23510 MIR519E-201ENST00000385075 84 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 MIR501-201ENST00000390204 84 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 RNU2-51P-201ENST00000410708 197 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 AL161932.1-201ENST00000437408 146 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 RNU6-287P-201ENST00000516230 98 ntBASIC0.12□□□□□ -2.39
TNFSF4P23510 RNU6-1232P-201ENST00000516299 86 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms