Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC067863.3-201ENST00000624172 122 ntBASIC0.38□□□□□ -2.35
CSF1P09603 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
CSF1P09603 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.37□□□□□ -2.35
CSF1P09603 Y_RNA.173-201ENST00000363776 113 ntBASIC0.36□□□□□ -2.35
CSF1P09603 RNU6-726P-201ENST00000364680 107 ntBASIC0.36□□□□□ -2.35
CSF1P09603 U8.6-201ENST00000364939 135 ntBASIC0.36□□□□□ -2.35
CSF1P09603 Y_RNA.549-201ENST00000384657 102 ntBASIC0.36□□□□□ -2.35
CSF1P09603 Y_RNA.57-201ENST00000362806 113 ntBASIC0.35□□□□□ -2.35
CSF1P09603 Y_RNA.68-201ENST00000362881 102 ntBASIC0.35□□□□□ -2.35
CSF1P09603 RNY3P2-201ENST00000362918 102 ntBASIC0.35□□□□□ -2.35
CSF1P09603 Y_RNA.221-201ENST00000364248 96 ntBASIC0.35□□□□□ -2.35
CSF1P09603 SNORD116-21-201ENST00000384507 92 ntBASIC0.35□□□□□ -2.35
CSF1P09603 MIR577-201ENST00000385196 96 ntBASIC0.35□□□□□ -2.35
CSF1P09603 RNU6-1254P-201ENST00000391266 104 ntBASIC0.35□□□□□ -2.35
CSF1P09603 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
CSF1P09603 MIR5009-201ENST00000578736 100 ntBASIC0.35□□□□□ -2.35
CSF1P09603 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.35
CSF1P09603 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
CSF1P09603 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
CSF1P09603 Y_RNA.261-201ENST00000364631 102 ntBASIC0.34□□□□□ -2.36
CSF1P09603 RNU6-22P-201ENST00000384355 107 ntBASIC0.34□□□□□ -2.36
CSF1P09603 SNORD41.1-201ENST00000391000 69 ntBASIC0.34□□□□□ -2.36
CSF1P09603 RNU6-479P-201ENST00000516348 105 ntBASIC0.34□□□□□ -2.36
CSF1P09603 Y_RNA.681-201ENST00000516445 113 ntBASIC0.34□□□□□ -2.36
CSF1P09603 AL365222.1-201ENST00000614661 98 ntBASIC0.34□□□□□ -2.36
CSF1P09603 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
CSF1P09603 RNU6-834P-201ENST00000362367 110 ntBASIC0.33□□□□□ -2.36
CSF1P09603 RNU6-832P-201ENST00000363319 107 ntBASIC0.33□□□□□ -2.36
CSF1P09603 Y_RNA.323-201ENST00000365157 109 ntBASIC0.33□□□□□ -2.36
CSF1P09603 MIR516A2-201ENST00000384888 90 ntBASIC0.33□□□□□ -2.36
CSF1P09603 MIR516A1-201ENST00000385033 90 ntBASIC0.33□□□□□ -2.36
CSF1P09603 RNU6-1168P-201ENST00000390831 104 ntBASIC0.33□□□□□ -2.36
CSF1P09603 RNU7-106P-201ENST00000459514 67 ntBASIC0.33□□□□□ -2.36
CSF1P09603 AL162376.1-201ENST00000624117 175 ntBASIC0.33□□□□□ -2.36
CSF1P09603 RNA5SP205-201ENST00000364653 136 ntBASIC0.32□□□□□ -2.36
CSF1P09603 SNORD113-1-201ENST00000365321 69 ntBASIC0.32□□□□□ -2.36
CSF1P09603 RNU6-524P-201ENST00000384270 107 ntBASIC0.32□□□□□ -2.36
CSF1P09603 RNU6-476P-201ENST00000384726 107 ntBASIC0.32□□□□□ -2.36
CSF1P09603 RNU6-243P-201ENST00000391140 107 ntBASIC0.32□□□□□ -2.36
CSF1P09603 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
CSF1P09603 RNU7-74P-201ENST00000459104 62 ntBASIC0.32□□□□□ -2.36
CSF1P09603 RNU6-1265P-201ENST00000516342 103 ntBASIC0.32□□□□□ -2.36
CSF1P09603 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
CSF1P09603 AC073869.9-201ENST00000641610 120 ntBASIC0.32□□□□□ -2.36
CSF1P09603 Y_RNA.10-201ENST00000362371 110 ntBASIC0.31□□□□□ -2.36
CSF1P09603 RNU6-1125P-201ENST00000363601 107 ntBASIC0.31□□□□□ -2.36
CSF1P09603 Y_RNA.178-201ENST00000363832 102 ntBASIC0.31□□□□□ -2.36
CSF1P09603 RNU6-1144P-201ENST00000384247 104 ntBASIC0.31□□□□□ -2.36
CSF1P09603 RNU6-480P-201ENST00000384332 107 ntBASIC0.31□□□□□ -2.36
CSF1P09603 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.31□□□□□ -2.36
CSF1P09603 RNU6-313P-201ENST00000516317 112 ntBASIC0.31□□□□□ -2.36
CSF1P09603 RNU7-13P-201ENST00000516413 62 ntBASIC0.31□□□□□ -2.36
CSF1P09603 MIR4439-201ENST00000583746 80 ntBASIC0.31□□□□□ -2.36
CSF1P09603 SNORD115-44-201ENST00000365391 82 ntBASIC0.3□□□□□ -2.36
CSF1P09603 RNU6-1064P-201ENST00000410626 104 ntBASIC0.3□□□□□ -2.36
CSF1P09603 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.3□□□□□ -2.36
CSF1P09603 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
CSF1P09603 AC141557.1-201ENST00000540982 400 ntBASIC0.3□□□□□ -2.36
CSF1P09603 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.3□□□□□ -2.36
CSF1P09603 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.3□□□□□ -2.36
CSF1P09603 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CSF1P09603 SNORD45B-201ENST00000364617 72 ntBASIC0.29□□□□□ -2.36
CSF1P09603 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.29□□□□□ -2.36
CSF1P09603 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
CSF1P09603 RNU6-789P-201ENST00000517105 102 ntBASIC0.29□□□□□ -2.36
CSF1P09603 SNORD36A-201ENST00000362874 73 ntBASIC0.28□□□□□ -2.36
CSF1P09603 RNU4-36P-201ENST00000364294 144 ntBASIC0.28□□□□□ -2.36
CSF1P09603 RNU6-1107P-201ENST00000364817 104 ntBASIC0.28□□□□□ -2.36
CSF1P09603 RNU6-1154P-201ENST00000391001 104 ntBASIC0.28□□□□□ -2.36
CSF1P09603 Y_RNA.659-201ENST00000515994 113 ntBASIC0.28□□□□□ -2.36
CSF1P09603 MIR5706-201ENST00000579841 80 ntBASIC0.28□□□□□ -2.36
CSF1P09603 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
CSF1P09603 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
CSF1P09603 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
CSF1P09603 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNU6-509P-201ENST00000363519 107 ntBASIC0.27□□□□□ -2.37
CSF1P09603 Y_RNA.163-201ENST00000363702 113 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNU6-1163P-201ENST00000364516 107 ntBASIC0.27□□□□□ -2.37
CSF1P09603 SNORA2A-201ENST00000383885 135 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNU6-1056P-201ENST00000383996 107 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNU2-51P-201ENST00000410708 197 ntBASIC0.27□□□□□ -2.37
CSF1P09603 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
CSF1P09603 RNU6-1014P-201ENST00000383940 103 ntBASIC0.26□□□□□ -2.37
CSF1P09603 Y_RNA.423-201ENST00000384057 113 ntBASIC0.26□□□□□ -2.37
CSF1P09603 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.26□□□□□ -2.37
CSF1P09603 MIR3920-201ENST00000581751 86 ntBASIC0.26□□□□□ -2.37
CSF1P09603 U7.6-201ENST00000610841 64 ntBASIC0.26□□□□□ -2.37
CSF1P09603 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
CSF1P09603 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
CSF1P09603 RNU6-1244P-201ENST00000363614 108 ntBASIC0.25□□□□□ -2.37
CSF1P09603 Y_RNA.433-201ENST00000384089 102 ntBASIC0.25□□□□□ -2.37
CSF1P09603 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
CSF1P09603 RNU6-269P-201ENST00000391077 97 ntBASIC0.24□□□□□ -2.37
CSF1P09603 RNU6-466P-201ENST00000391224 103 ntBASIC0.24□□□□□ -2.37
CSF1P09603 TRDV1-202ENST00000621643 102 ntBASIC0.24□□□□□ -2.37
CSF1P09603 Y_RNA.78-201ENST00000362970 110 ntBASIC0.23□□□□□ -2.37
CSF1P09603 Y_RNA.601-201ENST00000410500 113 ntBASIC0.23□□□□□ -2.37
CSF1P09603 Y_RNA.95-201ENST00000363079 95 ntBASIC0.22□□□□□ -2.37
CSF1P09603 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms