Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC007012.1-201ENST00000567192 175 ntBASIC-0.49□□□□□ -2.49
HLA-DQB1P01920 RNU6-363P-201ENST00000362895 105 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 RNU6-154P-201ENST00000384306 106 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 MIR4645-201ENST00000583158 77 ntBASIC-0.5□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 RNU6-957P-201ENST00000363652 99 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 MIR548D2-201ENST00000384955 97 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 MIR548G-201ENST00000408442 89 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 SNORA7.5-201ENST00000410672 110 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 RNA5SP136-201ENST00000410906 107 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 AP001340.1-201ENST00000624405 217 ntBASIC-0.51□□□□□ -2.49
HLA-DQB1P01920 RNU6-235P-201ENST00000362644 107 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 SNORD38.1-201ENST00000363863 68 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 RNU6-151P-201ENST00000364158 107 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 MIR329-2-201ENST00000385029 84 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 RNU6-90P-201ENST00000606352 106 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.52□□□□□ -2.49
HLA-DQB1P01920 RNU6-647P-201ENST00000364243 107 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 RNU6-463P-201ENST00000384340 107 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 SPINT5P-201ENST00000448174 155 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 AC074198.2-201ENST00000508153 258 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
HLA-DQB1P01920 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 RNU6-200P-201ENST00000364743 107 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 MIR1263-201ENST00000408324 86 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 RNU6-138P-201ENST00000515952 107 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 MIR4696-201ENST00000581431 70 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 AL512310.12-203ENST00000640543 90 ntBASIC-0.54□□□□□ -2.5
HLA-DQB1P01920 MIR20A-201ENST00000362279 71 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 RNU6-379P-201ENST00000363813 104 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 MIR9-2-201ENST00000384838 87 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 MIR652-201ENST00000385278 98 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 MIR759-201ENST00000390224 91 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 RNU6-394P-201ENST00000410735 107 ntBASIC-0.55□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 AC244090.1-201ENST00000441884 93 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 RNU6-781P-201ENST00000516377 101 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 AP001328.1-201ENST00000528550 176 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 MIR548O2-201ENST00000616090 70 ntBASIC-0.56□□□□□ -2.5
HLA-DQB1P01920 RNU6-664P-201ENST00000362381 107 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 SNORD101-201ENST00000384027 73 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 SNORA32.3-201ENST00000384772 121 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 MIR489-201ENST00000384923 84 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 SNORA49-201ENST00000386157 136 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 MIR513C-201ENST00000401352 84 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 AL158147.1-201ENST00000443970 75 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 AC145423.2-201ENST00000610631 239 ntBASIC-0.57□□□□□ -2.5
HLA-DQB1P01920 RNU6-409P-201ENST00000384114 104 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 RNA5SP66-201ENST00000517178 101 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 MIR548X2-201ENST00000579776 100 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 AL442128.1-201ENST00000615151 90 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 RNU6-900P-201ENST00000384498 102 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 RPS29P8-201ENST00000445109 171 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 snoU13.11-201ENST00000459219 104 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 AC004792.1-201ENST00000614523 137 ntBASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.59□□□□□ -2.5
HLA-DQB1P01920 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 SNORD116-18-201ENST00000383961 92 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 MT-TG-201ENST00000387429 68 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 MIR216B-201ENST00000390186 82 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
HLA-DQB1P01920 AL109933.3-201ENST00000619095 188 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms