Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MIR1276-201ENST00000408707 83 ntBASIC1.15□□□□□ -2.23
SCAF4O95104 Y_RNA.809-201ENST00000516058 95 ntBASIC1.15□□□□□ -2.23
SCAF4O95104 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.15□□□□□ -2.23
SCAF4O95104 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SCAF4O95104 Y_RNA.313-201ENST00000365095 103 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 MIR520F-201ENST00000384824 87 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 SNORA67.5-201ENST00000391036 107 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 RNU1-119P-201ENST00000391122 165 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 MIR1255A-201ENST00000408338 113 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 Y_RNA.607-201ENST00000410597 98 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 AL354695.1-201ENST00000427935 228 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 AC097635.1-201ENST00000450678 155 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 RNU7-95P-201ENST00000459222 64 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 AC093729.1-201ENST00000513074 128 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 AC140658.3-201ENST00000567603 271 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 MIR4536-1-201ENST00000583537 88 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
SCAF4O95104 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.14□□□□□ -2.23
SCAF4O95104 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCAF4O95104 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCAF4O95104 Y_RNA.437-201ENST00000384113 113 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 RNA5SP292-201ENST00000390974 118 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 RNU6-466P-201ENST00000391224 103 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 MIR1236-201ENST00000408340 102 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 RNA5SP225-201ENST00000410874 135 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 AC138907.6-201ENST00000568401 126 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 AC138869.1-201ENST00000568623 124 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 uc_338.16-201ENST00000621804 95 ntBASIC1.13□□□□□ -2.23
SCAF4O95104 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCAF4O95104 Y_RNA.32-201ENST00000362589 110 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 MIR599-201ENST00000385069 95 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 AC244505.6-201ENST00000452829 130 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 RNU6-65P-201ENST00000516332 98 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 MIR3064-201ENST00000581130 66 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 MIR6779-201ENST00000617283 64 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 TRDV1-202ENST00000621643 102 ntBASIC1.12□□□□□ -2.23
SCAF4O95104 Y_RNA.316-201ENST00000365118 111 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 RNU6-811P-201ENST00000384069 107 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 RNU6-1265P-201ENST00000516342 103 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 RNU6-1110P-201ENST00000516462 101 ntBASIC1.11□□□□□ -2.23
SCAF4O95104 MIRLET7F1-201ENST00000362202 87 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.1□□□□□ -2.23
SCAF4O95104 SNORA25.13-201ENST00000516395 103 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 SNORA31.14-201ENST00000516728 116 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 AC104996.3-201ENST00000590718 94 ntBASIC1.1□□□□□ -2.23
SCAF4O95104 RNU6-652P-201ENST00000365488 107 ntBASIC1.09□□□□□ -2.23
SCAF4O95104 MIR520H-201ENST00000385126 88 ntBASIC1.09□□□□□ -2.23
SCAF4O95104 SNORA18.5-201ENST00000516616 101 ntBASIC1.09□□□□□ -2.23
SCAF4O95104 MTRNR2L2-201ENST00000604882 87 ntBASIC1.09□□□□□ -2.23
SCAF4O95104 U6.100-201ENST00000636230 99 ntBASIC1.09□□□□□ -2.23
SCAF4O95104 ZNF209P-201ENST00000593450 2304 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 SNORD115-37-201ENST00000363768 82 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 U7.7-201ENST00000459276 60 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 RNU6-638P-201ENST00000516582 104 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAF4O95104 MIR4796-201ENST00000580742 81 ntBASIC1.08□□□□□ -2.24
SCAF4O95104 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAF4O95104 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SCAF4O95104 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
SCAF4O95104 Y_RNA.94-201ENST00000363068 106 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 RNU6-624P-201ENST00000363411 107 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 SNORD114-26-201ENST00000363543 72 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 SNORD90-201ENST00000391145 111 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 RNU6-279P-201ENST00000391297 101 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 FABP5P4-201ENST00000437203 171 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 AC002350.1-201ENST00000490759 375 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
SCAF4O95104 Y_RNA.221-201ENST00000364248 96 ntBASIC1.06□□□□□ -2.24
SCAF4O95104 Y_RNA.491-201ENST00000384417 107 ntBASIC1.06□□□□□ -2.24
SCAF4O95104 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
SCAF4O95104 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.06□□□□□ -2.24
SCAF4O95104 MIR4696-201ENST00000581431 70 ntBASIC1.06□□□□□ -2.24
SCAF4O95104 MIR6515-201ENST00000619843 57 ntBASIC1.06□□□□□ -2.24
SCAF4O95104 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCAF4O95104 SNORA7.1-201ENST00000363750 139 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 Y_RNA.174-201ENST00000363781 105 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 RNU6-478P-201ENST00000363904 110 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 MIR548U-201ENST00000390728 81 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCAF4O95104 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
SCAF4O95104 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SCAF4O95104 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.04□□□□□ -2.24
SCAF4O95104 RNU6-664P-201ENST00000362381 107 ntBASIC1.04□□□□□ -2.24
SCAF4O95104 Y_RNA.36-201ENST00000362602 112 ntBASIC1.04□□□□□ -2.24
SCAF4O95104 RNA5SP403-201ENST00000363598 108 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 3430.7 ms