Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.24□□□□□ -2.21
PRPF40AO75400 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 MIR1287-201ENST00000408492 90 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 AC244098.3-201ENST00000424803 96 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 RNU7-85P-201ENST00000458851 63 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 SNORD4B-201ENST00000459083 72 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 RNA5SP102-201ENST00000516865 106 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
PRPF40AO75400 RNU4-45P-201ENST00000365469 141 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 IGLL4P-201ENST00000614590 133 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 MIR4679-1-201ENST00000637619 75 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 MIR450A2-201ENST00000385022 100 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 Y_RNA.593-201ENST00000410292 98 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 RNA5SP222-201ENST00000411039 105 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
PRPF40AO75400 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.21□□□□□ -2.22
PRPF40AO75400 MIR3678-201ENST00000578455 94 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 Y_RNA.620-201ENST00000411009 88 ntBASIC1.2□□□□□ -2.22
PRPF40AO75400 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
PRPF40AO75400 RNY1P1-201ENST00000364372 112 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 SNORD73B-201ENST00000364394 72 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 MIR4639-201ENST00000584938 69 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 MIR18A-201ENST00000362310 71 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU4-32P-201ENST00000363404 141 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU7-104P-201ENST00000459398 79 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU6-219P-201ENST00000364728 107 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 MIR548U-201ENST00000390728 81 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-267P-201ENST00000516714 103 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-762P-201ENST00000517107 102 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 MIR494-201ENST00000349529 81 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-633P-201ENST00000362612 103 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 SNORD18A-201ENST00000363753 72 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-811P-201ENST00000384069 107 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-675P-201ENST00000384236 104 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 MIR608-201ENST00000384820 100 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-75P-201ENST00000515944 104 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU7-13P-201ENST00000516413 62 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 U6.100-201ENST00000636230 99 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 SNORD28-201ENST00000384706 75 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 MIR519C-201ENST00000385053 87 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 Y_RNA.596-201ENST00000410462 109 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.15□□□□□ -2.23
PRPF40AO75400 RNU7-161P-201ENST00000517289 62 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PRPF40AO75400 RNU6-509P-201ENST00000363519 107 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORA36.2-201ENST00000384004 127 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORD101-201ENST00000384027 73 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 MIR548L-201ENST00000408303 86 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 MIR1236-201ENST00000408340 102 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.14□□□□□ -2.23
PRPF40AO75400 AC067863.3-201ENST00000624172 122 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORD115-37-201ENST00000363768 82 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 Y_RNA.224-201ENST00000364308 111 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 SNORD114-22-201ENST00000365423 72 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 RNU6-820P-201ENST00000384273 107 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 SNORA26.2-201ENST00000390922 122 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIR1302-4-201ENST00000408701 150 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIRLET7F1-201ENST00000362202 87 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 Y_RNA.239-201ENST00000364444 113 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 SNORD115-44-201ENST00000365391 82 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RN7SKP12-201ENST00000516275 143 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 AC104996.3-201ENST00000590718 94 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 Y_RNA.508-201ENST00000384502 114 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 Y_RNA.611-201ENST00000410682 108 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.11□□□□□ -2.23
PRPF40AO75400 RNA5SP47-201ENST00000517230 109 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 MIR3064-201ENST00000581130 66 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 AC062037.1-201ENST00000605302 128 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 RNU6-664P-201ENST00000362381 107 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 SNORD115-27-201ENST00000364430 82 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 RNU6-132P-201ENST00000383863 107 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 SCARNA16.5-201ENST00000517114 183 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 Y_RNA.73-201ENST00000362910 113 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR518E-201ENST00000385252 88 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 RNU6-1057P-201ENST00000517162 102 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR4696-201ENST00000581431 70 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
PRPF40AO75400 Y_RNA.491-201ENST00000384417 107 ntBASIC1.08□□□□□ -2.24
PRPF40AO75400 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PRPF40AO75400 RNY4P29-201ENST00000410801 97 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms