Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 Y_RNA.258-201ENST00000364613 105 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 SNORA19.1-201ENST00000410656 129 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 RNA5SP330-201ENST00000517096 96 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 MIR548AI-201ENST00000579940 88 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 RNU6-90P-201ENST00000606352 106 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 AC091304.10-201ENST00000641554 121 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CTNND1O60716 RNU6-1163P-201ENST00000364516 107 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 Y_RNA.342-201ENST00000365352 113 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 MIR519A1-201ENST00000385257 85 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 SNORD63B-201ENST00000411005 70 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 SPINT5P-201ENST00000448174 155 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 RNU6-904P-201ENST00000516206 101 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 RNU6-412P-201ENST00000516434 106 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.56□□□□□ -2.32
CTNND1O60716 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.56□□□□□ -2.32
CTNND1O60716 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.56□□□□□ -2.32
CTNND1O60716 MIR330-201ENST00000362196 94 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 Y_RNA.163-201ENST00000363702 113 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 MIR599-201ENST00000385069 95 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 MIR548G-201ENST00000408442 89 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 AC097635.1-201ENST00000450678 155 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.55□□□□□ -2.32
CTNND1O60716 RNA5SP227-201ENST00000516184 113 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 uc_338.28-201ENST00000612082 187 ntBASIC0.55□□□□□ -2.32
CTNND1O60716 Y_RNA.78-201ENST00000362970 110 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 RNU7-106P-201ENST00000459514 67 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 RNU6-919P-201ENST00000516731 104 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 MIR548Z-201ENST00000584743 97 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 AC096720.1-201ENST00000604441 183 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
CTNND1O60716 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
CTNND1O60716 AL035461.1-201ENST00000421490 332 ntBASIC0.53□□□□□ -2.32
CTNND1O60716 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
CTNND1O60716 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
CTNND1O60716 Y_RNA.809-201ENST00000516058 95 ntBASIC0.53□□□□□ -2.32
CTNND1O60716 MIR4777-201ENST00000583710 86 ntBASIC0.53□□□□□ -2.32
CTNND1O60716 Y_RNA.115-201ENST00000363272 98 ntBASIC0.52□□□□□ -2.33
CTNND1O60716 RNU6-1244P-201ENST00000363614 108 ntBASIC0.52□□□□□ -2.33
CTNND1O60716 RNU6-44P-201ENST00000384045 107 ntBASIC0.52□□□□□ -2.33
CTNND1O60716 MIR590-201ENST00000385008 97 ntBASIC0.52□□□□□ -2.33
CTNND1O60716 RNU7-195P-201ENST00000458793 62 ntBASIC0.52□□□□□ -2.33
CTNND1O60716 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.52□□□□□ -2.33
CTNND1O60716 SNORA63.4-201ENST00000362763 126 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 AC109327.2-201ENST00000448339 378 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 AC141557.1-201ENST00000540982 400 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 MIR7107-201ENST00000611489 80 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 AC012531.4-201ENST00000616509 177 ntBASIC0.51□□□□□ -2.33
CTNND1O60716 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 RNU6-766P-201ENST00000362478 107 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 SNORD36A-201ENST00000362874 73 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 RNU6-1260P-201ENST00000362944 107 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 Y_RNA.95-201ENST00000363079 95 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 MIR516A2-201ENST00000384888 90 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 MIR516A1-201ENST00000385033 90 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 Y_RNA.601-201ENST00000410500 113 ntBASIC0.5□□□□□ -2.33
CTNND1O60716 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.5□□□□□ -2.33
CTNND1O60716 Y_RNA.467-201ENST00000384297 102 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 RNU2-59P-201ENST00000410482 191 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 RNU6-863P-201ENST00000515989 104 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 RNU6-1265P-201ENST00000516342 103 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 RNU6-109P-201ENST00000516364 107 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 RNU6-184P-201ENST00000516514 107 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 MIR4439-201ENST00000583746 80 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 AC067863.3-201ENST00000624172 122 ntBASIC0.49□□□□□ -2.33
CTNND1O60716 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CTNND1O60716 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
CTNND1O60716 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
CTNND1O60716 MIR1302-5-201ENST00000408164 150 ntBASIC0.48□□□□□ -2.33
CTNND1O60716 RNU6-795P-201ENST00000516323 103 ntBASIC0.48□□□□□ -2.33
CTNND1O60716 AL109933.3-201ENST00000619095 188 ntBASIC0.48□□□□□ -2.33
CTNND1O60716 MIR450A1-201ENST00000362262 91 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 Y_RNA.30-201ENST00000362572 97 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-726P-201ENST00000364680 107 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 Y_RNA.374-201ENST00000365606 101 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-716P-201ENST00000365621 103 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-147P-201ENST00000383983 107 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-756P-201ENST00000383997 107 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 SNORA51.5-201ENST00000384126 131 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-1254P-201ENST00000391266 104 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 MIR548L-201ENST00000408303 86 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 SCARNA23-201ENST00000516060 130 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 RNU6-86P-201ENST00000606534 107 ntBASIC0.47□□□□□ -2.33
CTNND1O60716 Y_RNA.57-201ENST00000362806 113 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 SNORD45B-201ENST00000364617 72 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 MIR181B2-201ENST00000385004 89 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 AC069271.1-201ENST00000445577 156 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 Y_RNA.659-201ENST00000515994 113 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 RNU6-158P-201ENST00000517104 100 ntBASIC0.46□□□□□ -2.34
CTNND1O60716 Y_RNA.818-201ENST00000618813 71 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms