Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 MIR548L-201ENST00000408303 86 ntBASIC0.38□□□□□ -2.35
NCK2O43639 SPINT5P-201ENST00000448174 155 ntBASIC0.38□□□□□ -2.35
NCK2O43639 RNU6-726P-201ENST00000364680 107 ntBASIC0.37□□□□□ -2.35
NCK2O43639 Y_RNA.353-201ENST00000365440 108 ntBASIC0.37□□□□□ -2.35
NCK2O43639 Y_RNA.525-201ENST00000384570 113 ntBASIC0.37□□□□□ -2.35
NCK2O43639 HAR1A.1-201ENST00000459583 118 ntBASIC0.37□□□□□ -2.35
NCK2O43639 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.37□□□□□ -2.35
NCK2O43639 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
NCK2O43639 Y_RNA.173-201ENST00000363776 113 ntBASIC0.36□□□□□ -2.35
NCK2O43639 RNU6-880P-201ENST00000384526 107 ntBASIC0.36□□□□□ -2.35
NCK2O43639 SNORD41.1-201ENST00000391000 69 ntBASIC0.36□□□□□ -2.35
NCK2O43639 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
NCK2O43639 RNU7-104P-201ENST00000459398 79 ntBASIC0.36□□□□□ -2.35
NCK2O43639 RNU6-412P-201ENST00000516434 106 ntBASIC0.36□□□□□ -2.35
NCK2O43639 AC068339.1-201ENST00000526965 141 ntBASIC0.36□□□□□ -2.35
NCK2O43639 AL035470.1-201ENST00000622571 220 ntBASIC0.36□□□□□ -2.35
NCK2O43639 RNU6-1254P-201ENST00000391266 104 ntBASIC0.35□□□□□ -2.35
NCK2O43639 Y_RNA.221-201ENST00000364248 96 ntBASIC0.34□□□□□ -2.36
NCK2O43639 Y_RNA.281-201ENST00000364774 94 ntBASIC0.34□□□□□ -2.36
NCK2O43639 RNU6-1117P-201ENST00000384525 104 ntBASIC0.34□□□□□ -2.36
NCK2O43639 MIR548A1-201ENST00000385041 97 ntBASIC0.34□□□□□ -2.36
NCK2O43639 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.34□□□□□ -2.36
NCK2O43639 RNU7-74P-201ENST00000459104 62 ntBASIC0.34□□□□□ -2.36
NCK2O43639 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
NCK2O43639 RNU6-62P-201ENST00000516526 102 ntBASIC0.34□□□□□ -2.36
NCK2O43639 AL162376.1-201ENST00000624117 175 ntBASIC0.34□□□□□ -2.36
NCK2O43639 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.34□□□□□ -2.36
NCK2O43639 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.36
NCK2O43639 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
NCK2O43639 RNY3P2-201ENST00000362918 102 ntBASIC0.33□□□□□ -2.36
NCK2O43639 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
NCK2O43639 AC069271.1-201ENST00000445577 156 ntBASIC0.33□□□□□ -2.36
NCK2O43639 MIR5009-201ENST00000578736 100 ntBASIC0.33□□□□□ -2.36
NCK2O43639 AC132825.6-201ENST00000638861 357 ntBASIC0.33□□□□□ -2.36
NCK2O43639 AC073869.9-201ENST00000641610 120 ntBASIC0.33□□□□□ -2.36
NCK2O43639 Y_RNA.57-201ENST00000362806 113 ntBASIC0.32□□□□□ -2.36
NCK2O43639 SNORD115-44-201ENST00000365391 82 ntBASIC0.32□□□□□ -2.36
NCK2O43639 RNU6-243P-201ENST00000391140 107 ntBASIC0.32□□□□□ -2.36
NCK2O43639 RNA5SP299-201ENST00000391203 116 ntBASIC0.32□□□□□ -2.36
NCK2O43639 RNU7-106P-201ENST00000459514 67 ntBASIC0.32□□□□□ -2.36
NCK2O43639 RNU6-834P-201ENST00000362367 110 ntBASIC0.31□□□□□ -2.36
NCK2O43639 RNU6-1125P-201ENST00000363601 107 ntBASIC0.31□□□□□ -2.36
NCK2O43639 U8.6-201ENST00000364939 135 ntBASIC0.31□□□□□ -2.36
NCK2O43639 Y_RNA.323-201ENST00000365157 109 ntBASIC0.31□□□□□ -2.36
NCK2O43639 RNU6-524P-201ENST00000384270 107 ntBASIC0.31□□□□□ -2.36
NCK2O43639 RNU6-480P-201ENST00000384332 107 ntBASIC0.31□□□□□ -2.36
NCK2O43639 Y_RNA.549-201ENST00000384657 102 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR516A2-201ENST00000384888 90 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR516A1-201ENST00000385033 90 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
NCK2O43639 RNU6-1265P-201ENST00000516342 103 ntBASIC0.31□□□□□ -2.36
NCK2O43639 RNU7-13P-201ENST00000516413 62 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR5706-201ENST00000579841 80 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR3910-1-201ENST00000580936 111 ntBASIC0.31□□□□□ -2.36
NCK2O43639 MIR4439-201ENST00000583746 80 ntBASIC0.31□□□□□ -2.36
NCK2O43639 Y_RNA.10-201ENST00000362371 110 ntBASIC0.3□□□□□ -2.36
NCK2O43639 RNU6-832P-201ENST00000363319 107 ntBASIC0.3□□□□□ -2.36
NCK2O43639 Y_RNA.247-201ENST00000364500 92 ntBASIC0.3□□□□□ -2.36
NCK2O43639 SNORD116-21-201ENST00000384507 92 ntBASIC0.3□□□□□ -2.36
NCK2O43639 MIR4315-1-201ENST00000636800 73 ntBASIC0.3□□□□□ -2.36
NCK2O43639 MIR6086-201ENST00000638065 55 ntBASIC0.3□□□□□ -2.36
NCK2O43639 MIR4315-2-201ENST00000640925 73 ntBASIC0.3□□□□□ -2.36
NCK2O43639 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
NCK2O43639 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
NCK2O43639 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
NCK2O43639 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.29□□□□□ -2.36
NCK2O43639 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
NCK2O43639 U7.6-201ENST00000610841 64 ntBASIC0.29□□□□□ -2.36
NCK2O43639 RNU6-509P-201ENST00000363519 107 ntBASIC0.28□□□□□ -2.36
NCK2O43639 RNU6-479P-201ENST00000516348 105 ntBASIC0.28□□□□□ -2.36
NCK2O43639 SNORD36A-201ENST00000362874 73 ntBASIC0.27□□□□□ -2.37
NCK2O43639 RNU6-22P-201ENST00000384355 107 ntBASIC0.27□□□□□ -2.37
NCK2O43639 AC141557.1-201ENST00000540982 400 ntBASIC0.27□□□□□ -2.37
NCK2O43639 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
NCK2O43639 MIR6755-201ENST00000619993 66 ntBASIC0.27□□□□□ -2.37
NCK2O43639 SNORD45B-201ENST00000364617 72 ntBASIC0.26□□□□□ -2.37
NCK2O43639 Y_RNA.261-201ENST00000364631 102 ntBASIC0.26□□□□□ -2.37
NCK2O43639 RNA5SP205-201ENST00000364653 136 ntBASIC0.26□□□□□ -2.37
NCK2O43639 SNORD113-1-201ENST00000365321 69 ntBASIC0.26□□□□□ -2.37
NCK2O43639 RNU6-1168P-201ENST00000390831 104 ntBASIC0.26□□□□□ -2.37
NCK2O43639 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.26□□□□□ -2.37
NCK2O43639 MIR3920-201ENST00000581751 86 ntBASIC0.26□□□□□ -2.37
NCK2O43639 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
NCK2O43639 MIR6759-201ENST00000638110 65 ntBASIC0.26□□□□□ -2.37
NCK2O43639 Y_RNA.423-201ENST00000384057 113 ntBASIC0.25□□□□□ -2.37
NCK2O43639 RNU6-1144P-201ENST00000384247 104 ntBASIC0.25□□□□□ -2.37
NCK2O43639 RNU6-476P-201ENST00000384726 107 ntBASIC0.25□□□□□ -2.37
NCK2O43639 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NCK2O43639 AL365222.1-201ENST00000614661 98 ntBASIC0.25□□□□□ -2.37
NCK2O43639 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
NCK2O43639 Y_RNA.163-201ENST00000363702 113 ntBASIC0.24□□□□□ -2.37
NCK2O43639 RNU4-36P-201ENST00000364294 144 ntBASIC0.24□□□□□ -2.37
NCK2O43639 RNU6-1064P-201ENST00000410626 104 ntBASIC0.24□□□□□ -2.37
NCK2O43639 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.24□□□□□ -2.37
NCK2O43639 RNU6-1163P-201ENST00000364516 107 ntBASIC0.23□□□□□ -2.37
NCK2O43639 RNA5SP128-201ENST00000365305 116 ntBASIC0.23□□□□□ -2.37
NCK2O43639 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
NCK2O43639 RNU6-269P-201ENST00000391077 97 ntBASIC0.23□□□□□ -2.37
NCK2O43639 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.23□□□□□ -2.37
NCK2O43639 Y_RNA.659-201ENST00000515994 113 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms